Pseudomonas sp. WCS358, PC358_RS22185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCATCCAGGCCCAGCGGGATGTACTGGCCCAGCGCATCAGTGGCGGTGAGGCCAAGATCATGCCGACCCACGTCGAGCGTGTGGCCGAAGCCCAGCGCC GCCTGGCTGCCGAAGCGGACGAAGAACTGGCCCGCCTGACCGCGCTCAAGGCGGTCAACCCGAGCGTACGCGACAGCGAAATCGACGCCTTGCGCAAGCA GCGTGAAGAAGGCCTGGCGATGCTGGACAAAGCTGCCTTGCGCTTGGAAGCCATTCGCGTGCTGGTGGCTGGCTGACTATACGAGCGACAAGTTGGGCTG CTTGGCAGCCCATCGCAACACAAGGCTGCTCCTGCAACGGGAGCGGCTATATGCCTTGCTGCGATTGGCCTCATAACCAAATCATAGAAATCAAATTGCC ATTATTCAGGAAGGGCTAACTACCTCTTCCTATACTGCCTCTGGACAGTCTGCCAAGGGTTGTACCGCAGACGAGTGAAAACTCGACCAAGAGGCACGCA
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| DNA Sequence for Gene |
>PC358_RS22185
ATGGAATGGCTGGGTCTGCAACTGTTCGCCGATCTTCCGGCAACCGGACGAATCGTCATCGATTGTCGCCATGAACCCTTCCTGGTACTGCTCGCCTATA CCGTGGCCTGCGCGGGGTGCTTTGCGACCCTGGACATGGCCGAGCGCCAGTCCCATAGCGAACAGGCCACGGCGCAACGCCAATGGCGCATGCTCGGCGC CTGCTGCCTCGCCGGCGGTATCTGGGCCATGCACTTCATCAGCATGCTGGCCTTTCAGGCCCCGCTCGAAGTTCACTACGATGTGTCGCTGACCGTGCTG TCGCTGCTCATTGCCCTGATCGTCGCCTGGGTGGGCATGAACAGCATCAACCGTAGGCACATGCGCCCGTATCATTATCTGAAGCGTGCAGTACTCATCG CAGCCGGCATCATCTTCATGCATTTTGTCGGCATGGCCGCCCTCGAGACCGGCGCTCAACAGTACTACCAGACCGGGCTGCTACTGACCTCCATGGCCAT CGCCCTGCTCACCAGCCTCGCAGCGCTGCTGCTGGCGCGGCGCTTTCGCAACGGTAGCGGCACCTTGCACCAGGCCCTGAAGTACGGCGCTAGCCTGCTG ATGGCCGGCGGCATCGTCGCGACCCACTTCACGGCCATGTCGGCCATGACCTTGGTCATCCCCGCCGACACTGCGCTGCGTCTGCCGTCAGCCGACAACA GCCTGCAACTGGGGCTGACCATTGCATTCATCACGCTGCTGATCAGTGGTGCCAGCATCAGTGCGGCCTTGGCCGACAAGAAGCTGCAAAGCAAGGAGCA CGACCTGCGCCGGGTCAGCATGCTGCTCAACCAACTGGACCAGGCGCGAGCCTCGCTGCAACAGGCTGCGCACTACGACGCCCTGACCAACCTGATCAAC CGCCGCGGTTTCAATCAAGTGTTCGCCGAGCGCCTCGCCGAACAGAACGCCGATGACAACCGCCTGGCGGTGATGTTTCTCGACATCGACCATTTCAAAC GCATCAATGACAGCCTTGGCCATGCCGCCGGCGACGAACTGCTCAAAGTGATCGCCAACCACATCAAGGCAGCCACCCGCAGCCAAGACCTGGTGGCGCG CTTTGGTGGCGACGAGTTCTGCGTGGTCACCAGCCTCAACAACCGTGATGAAGCACGCCACCTGGCGCAGCGCATCATGCAGCGAATGAAGGACCCCATC GACCTGGGTGGCCGGCGCATGGTCATGACCACCAGTATCGGTATCAGCATTTTCCCCGACGATGGCAACACCGCCGAAGAGTTGCTCAAGCACGCCGACC TTGCCCTGTATCAGTCCAAGGGCAACGGGCGCAACAGCCTGACCTTCTTCAACGACAGCCTTAAAACCCGGGCCACGCTTGCCCTGCAGCTGGAAGAGGA ACTGCGCATCGCGCTGCTGGAAGAACGCGGGCTGTGCGTGCATTACCAGCCGATCTTCGACCTGCACAATGGCCAGGTGGCCAAGCTCGAAGCCCTGGTG CGCTGGCAGCACCCACAACACGGCCTGCTCGGGCCCGACCGTTTCATCGGCATCGCCGAAGCCAATGGTTTGATCATCGACCTCGACCTGTGGGTGCTGC GCCACGCCTGTGCCGACCTGGCGCAACTGCACCGCCACGGTTATGGCGACCTCAAGGTCACGGTGAACTGCTCGGCAGTCACGCTCAGTCACGATGAACT GGCCAGCGAGGTGGAGAAAGCGTTGTTTCACTCAGCCCTGGCGCCCCGCCACCTGGAGCTGGAAATCACCGAAAACGCATTGATGGGGGACATCCAGCGC ACTGTCAGCCTGCTCAAGCGCGTGTGCGCCCAGGGCGTGGCCCTGTCGATCGATGACTTCGGTACCGGTTACTCGTCGCTGGCCTACCTCAAACGCTTGC CGCTGGACATCCTGAAGATCGACAGAACCTTCCTGCAGGATGTGCCAGGCAGCCAGAAAGACCGCGAGATCGTCCAGGCCATCATCGTCATGGCCCACAC CCTGCACCTGCAGGTGGTCAGCGAGGGCGTAGAAACCGTCGAACAGCTGGAATTCCTCGAAACCCACGGCTGCGACTACCTGCAGGGCTACTTGCTCAGC CGCCCGGTGCCGCTGGGCGAATTGCGGCCGATCCTGGAGCTGCTGCAACGGCGCAATGGCCTGCTCAGCCCTTACTGCGATACAGCGCTACCAGGGTCGC CGGATCTTTTTGCAGATAGCCCTGGCTACCGTGCAGGCGCATCAATTGCGCGGCGAGGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGTGTCGCCGAGCCCTGCTCGCGAGAGAATTTGACTGCGCTGTCGAGGTCTTTGAGTAACGTCCGCACATGCCACTTGATCGGCTCGAAGCGGCTCTC GGCCATTTGCGGGGCAAGGATCTGCAGCGGTTTCGAATCGGCAAAGCCGCCCGCCAAGGCCTCGGCGATCAGTGTCGCGTCCACGCCTGACTGCTCGGCC AATGCCACCACTTCGGCGATCACCAAGGCATTGCAGGCCACGATCATCTGGTTGCAGGCCTTGGTCACCTGGCCGGCGCCAACGGCGCCCATGTGCGTCA CTCGCTGGCCAAGGGCCTGCAGTACGGGGAGTGCACGCTGCAAGTCGGCGGCCTCGCCACCGACCATGATGGCCAAGGTGCCGGCCTCGGCGCCCGGCGT GCCACCGGACACCGGGGCATCCAGCCAAGCCATGCCAGACAAGGCCGCGAGCGCAGCGGCCATCTCCCGGGTGGCGGTCGGTTCGAGGCTCGAAAAATCG
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MEWLGLQLFADLPATGRIVIDCRHEPFLVLLAYTVACAGCFATLDMAERQSHSEQATAQRQWRMLGACCLAGGIWAMHFISMLAFQAPLEVHYDVSLTVL SLLIALIVAWVGMNSINRRHMRPYHYLKRAVLIAAGIIFMHFVGMAALETGAQQYYQTGLLLTSMAIALLTSLAALLLARRFRNGSGTLHQALKYGASLL MAGGIVATHFTAMSAMTLVIPADTALRLPSADNSLQLGLTIAFITLLISGASISAALADKKLQSKEHDLRRVSMLLNQLDQARASLQQAAHYDALTNLIN RRGFNQVFAERLAEQNADDNRLAVMFLDIDHFKRINDSLGHAAGDELLKVIANHIKAATRSQDLVARFGGDEFCVVTSLNNRDEARHLAQRIMQRMKDPI DLGGRRMVMTTSIGISIFPDDGNTAEELLKHADLALYQSKGNGRNSLTFFNDSLKTRATLALQLEEELRIALLEERGLCVHYQPIFDLHNGQVAKLEALV RWQHPQHGLLGPDRFIGIAEANGLIIDLDLWVLRHACADLAQLHRHGYGDLKVTVNCSAVTLSHDELASEVEKALFHSALAPRHLELEITENALMGDIQR TVSLLKRVCAQGVALSIDDFGTGYSSLAYLKRLPLDILKIDRTFLQDVPGSQKDREIVQAIIVMAHTLHLQVVSEGVETVEQLEFLETHGCDYLQGYLLS RPVPLGELRPILELLQRRNGLLSPYCDTALPGSPDLFADSPGYRAGASIARRGH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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