Pseudomonas sp. WCS358, PC358_RS22135

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	437	592	4.32E-46
CDD	cd01948	EAL	IPR001633	EAL domain	608	844	3.17831E-106
SMART	SM00086	pac_2	IPR001610	PAC motif	380	421	0.001
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	421	592	5.5E-59
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	294	419	1.4E-20
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	282	852	0.0
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	294	419	4.03E-22
Pfam	PF05228	CHASE4 domain	IPR007892	CHASE4	62	213	2.6E-14
SMART	SM00091	pas_2	IPR000014	PAS domain	307	373	1.1E-7
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	606	859	4.9E-94
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	433	587	1.2E-45
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	433	590	1.84385E-49
CDD	cd00130	PAS	IPR000014	PAS domain	316	418	2.19864E-7
SMART	SM00052	duf2_2	IPR001633	EAL domain	602	845	3.7E-113
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	426	605	1.0E-55
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	428	591	1.8E-40
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	607	852	1.83E-85
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	303	426	8.4E-12
Pfam	PF00563	EAL domain	IPR001633	EAL domain	608	840	1.8E-70
Coils	Coil	Coil	-	-	596	616	-
Pfam	PF13188	PAS domain	IPR000014	PAS domain	307	368	3.8E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.