Pseudomonas sp. WCS358, PC358_RS21560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGCCGGGCCGCTGCCGGGCAATTTTCCACGGCGCAATCGCATCATCAGCGGTTTGTCGCTGGGCGTGCTGGTGGTGGAGGCGAGCCTGGCCAGTGGTTC GTTGATAACCGCGCGGCTGGCGGCCGAGCAGGGCCGTGAGGTTTACGCCATCCCCGGTTCGATCCACCACCCAGGGGCCAAAGGCTGTCACCAGTTGATC CGTGATGGCGCGCTACTGGTGGAAAGCGTGGAGCAGATTCTGGAAAGCCTGCGAGGCTGGCAGAACCTGCCCCCTGCGATAGTGGACGAATATGTCCACC CCCTGCTTGCTCTGCTGCATGCTGCGCCACAGACTACCGAAAGCCTGGCCCGGTGCAGCGAGCAGCCGCTGGCCGACGTGCTGGCGCAACTGACCGAACT GGAGCTGCAAGGCCAGGTCAGCAATGAAGCCGGGCGTTGGTTTGCCCGTGCGGGCTAAGTACACTGCGCGCAAGCAAGGTTCATAGGCGGAGAGAGAGAA
DNA Sequence for Gene
>PC358_RS21560
ATGGTGAGCAGTTTTCGTGTGCAACAAGCCGCACGTGAGATCCGGGCGGGCGCGGTGATTGCCTACCCGACCGAAGCGGTCTGGGGCCTGGGCTGCGACC CGTGGAACGAGGACGCGGTATACCGCCTGCTGGCGCTCAAGTCGCGGCCTGTGGATAAAGGCCTGATCCTGGTCGCCGACAACATCCGCCAGTTCGACTT CCTGTTCGAGGATTTCCCCGAGGACTGGATCGACCGCATGGGCAGCACCTGGCCTGGCCCTAATACCTGGCTGGTGCCGCACCAGGACCTGTTGCCCGAG TGGGTGACAGGTGAGCACGACACGGTGGCACTGCGGGTCAGCGACCACCCGCAGGTGCGTGAGTTGTGTGCATTGGTTGGGCCGTTGATTTCCACCTCGT GCAACCCCGGCGGGCGCCCGGCGGCGAAAACCCGGTTGCGGGTGGAGCAGTACTTCCATGGGCAGTTGGATCTGGTACTGGGCGGGGCGCTGGGCGGGCG GAAGAACCCGAGTGTGATTCGCAACCTGGCGACTGGCGAAGTCGTTCGTCCGGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATTGCCAAGCGCCAATACACCTCCTTGTGGGAGCGGGCTTGCCCCGCGAAGAGGCCAGCCCAGGCGGCCAGTGTGTATAGCCCGGGCTTCGCCCTGGTTC GCGGGGCAAGCCCGCTCCCACATTTGTTTCGGGCCAGTCCCTTCTGGGAAGTCACCGCTGCCCGCCTTGTTGGTTCCATTTGATATCGAGGGTTACGCAA CTGCGGTTCCTCGATTTGCAGCCATGCACCAAGGCTGTAACCCACCTGACACAGAATTAATTGGCCCGAAACAGATGTGGGAGCGGGCTTGCCCCGCGAA GCGCCGCGCGGGCGGCGCTCGATATCCGCAACACCACAAAAACCAAGGCAGGCACTTGGTCGCCTCAACGCGGCCTTCTGTCAATCAAGGCAACAAGACA GTCGACCCCACAGTCCGCCGCGCCGACAACTCCGCCTGCGCCTTGGCCGCCTCACCCAACGGATACCGTTGCTGGATATCCACAACCACCTTGCCACTCG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSFRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEDAVYRLLALKSRPVDKGLILVADNIRQFDFLFEDFPEDWIDRMGSTWPGPNTWLVPHQDLLPE WVTGEHDTVALRVSDHPQVRELCALVGPLISTSCNPGGRPAAKTRLRVEQYFHGQLDLVLGGALGGRKNPSVIRNLATGEVVRPG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site