Pseudomonas sp. WCS358, PC358_RS21520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCAGATTTCCCAGCCCAGGCCCCAGGCGCCGAGGGTCGGCGATTCCCAGTTGTCTTCGACGAAACGGATGTCGTGGACCAGCGGATCCAGGCCGATG GCTTTCAGCGAGCCGAGGTACAGCTCCTGGAAGTTGGCCGGGTTCGGCTTGAGCACTACCTGGAACTGGTAGTAGTGCTGCAGGCGGTTTGGGTTTTCGC CATACCGCCCGTCGGCAGGGCGACGGCTAGGCTGCACGTAGGCGGCGTTCCAGGTCTCTGGGCCAACGGCGCGCAGGAACGTGGCGGTATGGAAAGTGCC GGCGCCTACTTCCATATCGTAGGGCTGAAGCACCACACAACCTTGAGCTGCCCAGTAGTTCTGCAGGGCGAGGATCAGGTCTTGGAAGGTACGCACGGCT GGCGTAGGCTGGCTCACGAAATTCACCTGTATCTGGGGATGCGGATGTAAAGAGCGGGAGTATAACCTGATTCGCCTCGCCCTCTACTCATTGGAGCCTT
|
|
| DNA Sequence for Gene |
>PC358_RS21520
ATGCCACGCTGCTTTTGGTGTACCGACGATCCGTTGTACCAGGCCTACCACGACCAGGAATGGGGAACACCGCAGCGTGATCCGGCGTTGCTGTTCGAGA TGCTTTTGCTCGAAGGGTTCCAGGCTGGGCTGTCATGGATCACGGTTTTGCGTAAACGCGAGCGCTATCGCGAGGTGCTGCACGGCTTCGATCCGTTGAA GTTGTCGCAGATGAGCGATGAACGCATCGAAGCGCTGATGCTCGACGCCGGCATCATCCGCAACCGCCTCAAGCTCAAGGCCGCCCGGCGCAACGCCCAG GCCTGGCTGGCTGTGGATAACCCCGCCGAGTGGCTCTGGTCGTTTGTCGGCGGCAAGCCCAAGGTCAATCATTTCGTGGGCCGCAGCGACGTGCCGGCGG TCACCGACGAAGCCAAGGCGATGAGCAAGGCCTTGCAAAAAGCTGGCTTCACCTTTGTTGGCCCGACCATCTGCTACGCCTTCATGCAGGCCACCGGCAT GGTCATGGACCACACCACCGATTGTGATCGCTACGCCGCCTTGGCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGGGTACAATGCGCGCCTTGCTGAAATAAGGAATTCGCCTGTGGAAAAGTTCAAGGGCGCCCTGATGGTCGGGGTGCTTCGACTGTTCGCCAAGTTGCC CTGGGGCGCGGTACAGCGCGTCGGCGCCGGTATCGGCTGGCTGATGTGGAAGGTCCCGAACGGGTCGCGCAACGTGGTGCGTATCAACCTGGCCAAGTGT TTCCCCGAGATGGACCCGGTCGCGCGTGAGCAGCTGGTTGGCCATGCGCTCAGAGATATCGGCAAGTCCTTCGTCGAGAGCGCGTGCGCCTGGATCTGGC CACCGCAGCGTTCGCTGGAGCTGGTCAAGGAAGTGCAAGGCCTGGAAGTGCTGGAGCAGGCCCTTGCCTCGGGCAAGGGCGTGGTCGGCATCACCAGCCA CCTGGGTAACTGGGAAGTGTTGAACCACTTCTACTGCAACCAGTGCAAACCGATCATCTTCTACCGCCCGCCGAAACTGAAGGCCGTGGATGACCTGCTG
|
|
| Amino Acid Sequence |
>3-methyladenine DNA glycosylase
MPRCFWCTDDPLYQAYHDQEWGTPQRDPALLFEMLLLEGFQAGLSWITVLRKRERYREVLHGFDPLKLSQMSDERIEALMLDAGIIRNRLKLKAARRNAQ AWLAVDNPAEWLWSFVGGKPKVNHFVGRSDVPAVTDEAKAMSKALQKAGFTFVGPTICYAFMQATGMVMDHTTDCDRYAALAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|