Pseudomonas sp. WCS358, PC358_RS21445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGCTGCCGCATGACGCAGCCTTCTTCATTGCCCAGCGCATCCGGTCCAACGTCCGTGAACTTGAAGGTGCACTGAAGCGGGTAATTGCTCACTCGCAC TTCATGGGCCGCGACATCACCATCGAACTGATTCGCGAATCGCTGAAGGATCTGCTGGCACTGCAGGACAAATTGGTCAGTGTGGATAACATCCAGCGCA CCGTGGCCGAGTACTACAAGATCAAGATCTCCGATCTGTTGTCCAAACGGCGCTCGCGCTCTGTCGCGCGCCCGCGCCAGGTGGCCATGGCCCTGTCGAA GGAGCTGACCAACCACAGTCTGCCGGAGATCGGCGACATGTTTGGTGGTCGCGACCACACGACCGTGCTGCACGCCTGCCGCAAGATCAACGAACTGAAG GAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGGACGCTGACGACCTGATGGCCGTCTGCGCAGCTAATTGAAGGCAAGGGACTAGACC
|
|
| DNA Sequence for Gene |
>PC358_RS21445
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTCGTCGAGCGCCGTCAGACCTTGCCGGTCCTGTCTAACGTAT TGCTGGTTGTGCAAGGCCAGCAGCTGTCGTTGACCGGTACCGACCTGGAAGTCGAACTGGTAGGCCGCGTGCAACTCGAAGAGCCAGCCGAGCCTGGCGA AATCACTGTCCCGGCGCGCAAGCTGATGGACATCTGCAAAAGCCTGCCGAACGACGTCCTGATCGATATCAAGGTCGACGAGCAAAAACTGTTGGTCAAG GCCGGCCGCAGCCGCTTTACCCTGTCGACCCTGCCTGCCAATGACTTCCCGACTGTGGAAGAAGGCCCGGGCTCGCTGACCTGCAACCTGGAGCAGAGCA AGCTGCGCCGCCTGATCGAGCGCACCAGCTTCGCCATGGCCCAGCAAGATGTTCGCTACTACCTCAACGGCATGCTGCTGGAGGTATCGCGTAACACCCT GCGTGCGGTGTCTACCGATGGTCACCGCCTGGCACTGTGCTCGATGAGTGCACCCATCGAGCAGGATGATCGCCATCAGGTCATCGTGCCGCGCAAAGGT ATCCTTGAGCTGGCGCGTCTGCTGACCGACCCTGAAGGCATGGTCAGTATCGTCCTGGGGCAGCACCATATCCGCGCGACCACCGGCGAATTCACCTTCA CCTCCAAGCTGGTGGACGGCAAGTTCCCTGACTACGAGCGCGTATTGCCCAAGGGCGGCGACAAACTGGTGGTGGGTGATCGTCAGGCACTGCGTGAGGC CTTCAGCCGTACTGCCATCCTGTCCAACGAGAAGTACCGCGGTATTCGCCTGCAACTGGCCGCTGGCCAATTGAAGATTCAGGCCAATAACCCGGAACAG GAAGAAGCTGAAGAAGAAATCAGCGTCGACTATAACGGCAGCGCGCTGGAAATCGGCTTCAACGTCAGCTACCTGCTGGACGTGCTGGGCGTCATGACAA CCGAGCAGGTGCGTCTGATTCTGTCCGACTCCAACAGCAGTGCGCTGCTGCAGGAGGCTGGCAATGATGATTCGTCCTACGTTGTCATGCCAATGCGTCT GTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTGTAGCAGAGCGAATGTCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACCTGCACCCGGTGACCCTCTCACCTTCTCCCCGCATCAACATCCTCT ACGGTGCTAATGGCAGCGGCAAGACCAGTGTGCTTGAAGCTGTGCACCTGCTTGGGCTGGCGCGGTCCTTCCGCAGTACGCGTCTTAACCCCGTCATCCA ATACGAGCAGCCAGCGTGCACCGTGTTTGGCGAGGTCGAGTTGACGTCGGGAGGCACCAGCAACCTGGGGGTATCTCGTGAACGGCAAGGCGAGTTCACA ATTCGCATCGACGGGCAGAATGCCAAAAGTGCTGCGCAGCTGGCCGAACTGTTGCCATTGCAGCTGATCAACCCAGACAGTTTCAGGTTGCTGGAGGGCG CCCCGAAAATTCGCCGCCAGTTCCTGGATTGGGGAGTGTTCCACGTGGAACCTCGGTTTTTGCCTGCCTGGCAGCGTCTGCAGAAGGCGCTCAGGCAGCG
|
|
| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDVLIDIKVDEQKLLVK AGRSRFTLSTLPANDFPTVEEGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLALCSMSAPIEQDDRHQVIVPRKG ILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQ EEAEEEISVDYNGSALEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|