Strain | Pseudomonas sp. WCS358 WCS358-Sc3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCATCCAGCAACATGGCCGGGTCATGCCCGGCCAGCGGGCTGAGCATCAGGTTGCGCACATCGTCACCGGCGGCATCGCGCGGGCCCAGGCCGGCGGCC AGCAACCTGGCGACCAGGCCATTGTGGTCGCTGCCGATACCGCGGACCTGCAGGTTGGCGCGGTTGGTCGCCTCGATCACGCCGCCGGCGAAGCGTTCGG CGGCCTCGGCCACGGCATCGGCCTGATCGGCCAGCAGCAGGCCACCGGGCAGCTTGACCCGGCAAATCCCACCATCACGCGCATTGACGATGCGCCACAA CCCCGGGCAGGCCGAGGGGCGAGGTGAAACATCGGGGGCTTGGGCCTGCTTCAAAGGGGTGTCCGGCAATCTGTGAAGTGCGCTTGAGTGTAGAAGGCGC GGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCTTATCGTTTACCCGGGGCCGCTTCGCGCCCCAGAAATGGCGGATTGAAACAC
|
|
DNA Sequence for Gene |
>PC358_RS18605
ATGGCACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAACGGCCTGGGCAAGCAGGCCCGGCGCGCCCTGCTGGGCGCTTCGCGGATCTTCG GCAGCCCCCGCCAACTGGCCTTGCTGCCGCGCTGCGTGGTCGGCGAGCGGCTGAGCTGGCCCACCCCGTTCGCCCTGGCGCCGGTACTCGCAGCGCGCGG TGCCCCTGTCTGCGTGTTGGCCAGCGGCGACCCGATGTTCTTCGGCGTCGGCGCCAGCCTGGCACGCCAGGTGCCCGCCAGTGAGATGCGCGTGCTGCCG ATGCCGTCCTCTTGCGCCCTGGCTGCCGCCCGCCTGGGCTGGCCGCTGCAGGAGGTGCAGGTGGTATCGGTGGTCGCCCGGCCGCTGGCGGCGCTCAATG CCCAGCTGCACAGCGGTGCCCGCCTGCTGGTGCTGAGCAACGACGGCGACAGCCCTGCCGCGATTGCCGCCCAGCTGTGCGCGCGTGGTTTCGGGCCAAG TCGCCTGCGCGTGTTCGAACACCTTGGCGGCGCCGATGAACGCGAACTGGCCGGCAGCGCCCAGGACTGGCCTCACACCCAGGTTGCAGCGCTGAACCTG GTGGCCATCGAGTGCCTCGCCGCGCCCGATGCACCACGCTTGCCACGGGTTGCCGGGCTGCCAGACACGGCCTTCCAGCATGACGGCCAACTGACCAAGC GCGATGTCCGCGCCATCACCCTGGCCCGCCTCGCCCCGCAGCCCGGCGAGCTGCTGTGGGACGTGGGCGCAGGCTGTGGCTCGATCGGCATCGAGTGGAT GCGTGCCCACCCTGCCTGCCGTGCGTTGGCCATCGAGGCCGACGAAGGGCGCCAGGGGTTTATCGAACACAACCGCGATGCACTGGGCGTACCCGGCCTG CAACTGGTACGCGGCAAGGCGCCGGCGGCATTGGCAGGCCTTGAGCAGCCCGACGCGATCTTCATCGGTGGCGGGGTAACCCGTGAAGGCGTGCTGGAGC TGTGCTGGGAGGGTCTGCGCCCGGGTGGGCGGCTGGTGGCCAACGCGGTCACCCTGCAAAGCGAATTGGCCCTGGCGCATTTTCGCGAGCAGCACGGTGG CGAGCTGACCCGTATCCATGTTGCCCACGTGCAGCCGCTAGGGGCGTTCGACACCTGGCGCCAGGCCTTGCCGATCACCTTGCTGGACGTGGTGAAACCC TTCGATGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGAAACCCACGAACAACCCGCGCCGCTGCGCAGCGGCCTGACCACCGGCAGCTGTGCCACCGCCACCAGCCTCGCAGCGGCGCGCCTGCTGCTGACAGGC GTCTGTGACGACGCAGTGAGCATCACCCTGCCCAAGGGCAAGGTGGTGCAGATGCGCCTGGAGTTCTGCCGTCGCGCAGGCCAGTGCGCTGAAGCCGGTA CCCTCAAGGACGCCGGCGACGACCCGGACGTGACCCATGGCGCCCTGCTCTACAGCCAGGTCCGCTTGCTGGCCGAGCCCGGCATCCGCTTTGTCGCCGG CCATGGTGTGGGGACCGTGACGCGCCCGGGGCTGGTACTGGCGGTGGGCGAGCCGGCGATCAACCCGGTGCCCCGGCGCATGATTGGCGAACACCTGCAA CGCCTGGCCGAGGCGTGTGCCTATCACGGCGGCTTCGAAGTGACGGTCAACGTGCAGGGCGGTGAATTGCTGGCGCTCAAAACCATGAACCCGCGCCTTG
|
|
Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MAPWLTVVGIGEDGFNGLGKQARRALLGASRIFGSPRQLALLPRCVVGERLSWPTPFALAPVLAARGAPVCVLASGDPMFFGVGASLARQVPASEMRVLP MPSSCALAAARLGWPLQEVQVVSVVARPLAALNAQLHSGARLLVLSNDGDSPAAIAAQLCARGFGPSRLRVFEHLGGADERELAGSAQDWPHTQVAALNL VAIECLAAPDAPRLPRVAGLPDTAFQHDGQLTKRDVRAITLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRALAIEADEGRQGFIEHNRDALGVPGL QLVRGKAPAALAGLEQPDAIFIGGGVTREGVLELCWEGLRPGGRLVANAVTLQSELALAHFREQHGGELTRIHVAHVQPLGAFDTWRQALPITLLDVVKP FDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|