Pseudomonas sp. WCS358, PC358_RS17800

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCATTGTCATCAACCGCCCATTGCCCGTGTTGCTCAACCCGTGAGCCAGATGCCCTGGCTGTCTTCGTGGCAGCCCAGGGCCTGCAGCGCATCGCCCTCG CAAGGCCCAGCCACGCATTCGCCGCTCTCTATAAGAAACAAGGCGCCATGATGGGCGCAGTGAATCAGGCTGGCGCTGTCATCGAGAAACGCATCGGTTG CGCAGTTCAGGGGGGTGCCCCGGTGTGGGCAGCGGTTGCGATAAAGGTACACCTGGCCCTGGCGGCGGACGCCGAGCAGGTCGACGCCGTCTACGCTGAA GGCGCGGCTGTGGCCCTCGGCCAATGAGCTGGAAGTACAAAGCAAGTGCATGGCAAGGAAGACTCGTGAAACACGTGATGGCTTGACGCTTCAATGCGAA TAATTATCAAATTTCCCGCATTCGCTGCGCCCAGCCGTCTATGGTGCGCAGTTCCGCCGCCCGCCACAAGGCGCGCGGCCCGCCTTCAGAAGGAAATCCG
DNA Sequence for Gene
>PC358_RS17800
ATGATGCGCCGCCCCGTCGCCCTGATCGCCCTGTGCGCAGGTTTAGTGCTGTCTACCCAGGCCCTGGCTGCCGAACTGCCGCAGCGTTGGGTCAGCGCTG GTGGCGCGCTTAGCGAATGGGTCAGTGCGCTGGGCGGCGAAGCGCACCTGGTTGGCGTCGATACCACCAGCCAACACCCCGAGTCGCTGAAGGCGCTACC GAGTGTCGGTTATCAGCGGCAGTTGTCCGCCGAAGGCGTTCTGAGCCTGCGTCCTGATGTGTTGGTGGGTACCGAAGAGATGGGGCCGCCACCGGTGCTG GCGCAGATCCGCAAGGCGGGCGTGCGGGTTGAACTGTTCTCGAGCAAGGCCGAACTCGACGCGGTCGATGAAAACCTCAGGCACCTGGGGCAATTGCTTG GTGCAGAGCAACAAGCCACTGCGCTGGCAACAGGCTATCGCCAGCAGCTGGATGGGCTGCAGGCCGAGGTCAAGCAAGCCCAGGTGGGCCAGAAGGCGCC CGGCGTGTTGCTGCTGGTTGGCCATGCCGGTGCCAAGCCGTTGATCGCTGGCCAAGGCACCGCGGGCGACTGGCTGCTGCGACAGGCCGGGGCGCGCAAC CTGGCGGAGCACCAAGGCTACAAGAACTTCTCCAGCGAAGCGCTGGCAGCGCTGGACCCGGACGTGGTGGTGTTTTCCGACCGTGCGTTGGCCGATGAGC AGGCGCTGCAGGCGTTGCTCAAGGAGAACCCGGCGCTGGCGGCCTCCCGTGCGGTGCGTGAGCAGCGCCTGGTGTCACTCGACCCGACGCTGCTGGTGGG CGGCCTTGGGCCACGCTTGCCGGCGTCCCTGCGCACGTTGGCTGGGGCCTTCTACCCAGCAGCCAAGGCCAGCTTCGCGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCAGCGCGTTCAGCCACGCACACTGATCGTCTGCCTGAGCCTGTTGTGCCTGTTGGCGGTGTGGTTGTCCCTGGCCCTGGGGCCGGTCAGCCTGCCGCT GTTCGATACCTTGCGCGCGGGCCTGCGTTTGTTGGGGCTGCCCGTGGCGGGTGATGACCTGCAGCAGGCCGAGATGATCCTCGGCCAGATCCGCCTGCCG CGCACCTTGCTGGGGCTGGCGGTCGGGGCGGTGCTGGCGCTGTCCGGCGTGGCCATGCAGGGGCTGTTCCGCAACCCGCTGGCCGACCCGGGGCTGGTGG GGGTCGCTGCCGGGGCGGCGATGGGCGCTGCGGTGGCCATCGTCGGTGGCAGCTGGTTTGGCGGCATGCCCGATGTGCTCGCGCCCTATCTGTTGTCGCT GTGTGCCTTTATCGGTGGCCTGGGGGTGACCGCGCTGGTCTATCGCCTGGGGCGGCGTGACGGCCAGACCAATGTCGCCACGATGTTGCTGGCCGGCGTG
Amino Acid Sequence
>ABC transporter substrate-binding protein
MMRRPVALIALCAGLVLSTQALAAELPQRWVSAGGALSEWVSALGGEAHLVGVDTTSQHPESLKALPSVGYQRQLSAEGVLSLRPDVLVGTEEMGPPPVL AQIRKAGVRVELFSSKAELDAVDENLRHLGQLLGAEQQATALATGYRQQLDGLQAEVKQAQVGQKAPGVLLLVGHAGAKPLIAGQGTAGDWLLRQAGARN LAEHQGYKNFSSEALAALDPDVVVFSDRALADEQALQALLKENPALAASRAVREQRLVSLDPTLLVGGLGPRLPASLRTLAGAFYPAAKASFAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site