Pseudomonas sp. WCS358, PC358_RS17390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTTCACCACGGGCGCGGCCGCAACCGGTGCTGCTGCCGCCTTGGCGGTCTTGCGCAGTTCGGCCAGCGACGGGGCCTTGCTTTTCGAGGCGGCTGCCGC CTCGGGTTTGACCAGCGAACGCTGGCACGACTTGCAGGATACGTCCTCGGTCACGGCAGTGCTGACAAGGGTCTGACTGCTGCGCCCACAGGCGGAATCG AGGCCATTGGAGGAAAAGTGAGTAACCAAAACCGAACATCTCCGAAGCGTTGTCATTGAAGCGGGCGGCATTCTCGCACAGGTTGCAGGGGCTTGCCGAA CCACAGGGGCGCGACCACGACCGTCGGCAGGCCGAGCGCCAGCGGACAACCGGGCTGGCACTTTGCCATAATCCTAGGCATGCTAGCCGGTTTAGGGTGT CCGGCCTTATAGTGCGCCACCGCGGTCTGGCAACCAGACACCGGCACCGACCGTGCATGATCAATCCCTGCCATCGCCAGCCCAATCGCAGGACCAACGC
DNA Sequence for Gene
>PC358_RS17390
TTGACCAATCTCACTCATCCGTCGTCGCTGCGTCCCGCTTCACTGGCCCCTGCTGCTTCCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGTTGGCCC TGATTCTGCTGGCCCTGCTGCTGTGGCAGCTGTTCGCCCAGTTCCGCCATACCCAGGCCGACCTGCGCAAGCAAAGCCTGGAGGCCACTGCGGAGCTTGC CGACCACCTCAGCCTGAACATGGCGCTCAAAGCCCAGCAGGCGGTGAATGTGGTACAGCCCTACGTCAATGCACCGACGCCCGCCGCCCTGCCCAGCCTG CTCGACACCCTGCGCGCACGCCTGCCCGCCCTGCGTGACCTGGCCTGGCTGGACACCAGCGGGCAGATCCGCGCCGACAGCCTGGCCGGCAGCCCAGACC GCCCATTGATTGGCGAGCTGCTGAGGTTGAACCAGGGGCGCCCCTACTTCTTCACCAACTCGGCAGACAACCGCACCCTTTACCTGTTGCTGCGCCAGTC CACCGAACAGGACCGCGGCTATTGGCTGCTGCGCCTGTCCGGGGCGTATTACCGTACCCTCACCGTGCACCTGGACAACCCGGGCCACCCGCTGTGGCTG CTGGAAAACAGCCGCAGCGGCGCGGTGCTGGAGCGCCATGCCACCGCGCGGACCAGCACCGCGCCGCTGCAGAGCGTGATGCTGGCGTTCATCGACAACA GCACCTGGCAGCTGCGCGGCCTGTTCGACGCCGAGCTGGCCCAGCAGAAGTTGCTACCGGCACTGATCGGCAAGTGCATGCTGGTGCTGTTTTGTGCCCT GCTACCGGTGCTGGCGTTGATCAACATGCGCCGCCGCCAACGCGCGCTGCAGGAAGACCGCCGGCGCTATCAGGAAATCTTCGAAGGCACCGGCGTTGCC CTGTGCGTGCTCGACCTCTCCAGCCTGCCCGGCCAGCTCGACCGCTACCACCTGCGCAACCACGCGGCCCTCAAGCACAGCCTGGCCCTGGACCCGAACC TGCGCCGCTCGCTGCTGCAGGAGTTGAAGATCACCGAGATCAACCAGGTGGCGCGCCAGTTGCTCAACGTCGAATGCCACGAGGGTGCCTGGCAGCGCCT GATCGACGGCAGCGGCGATGGCCGTGACAGCATCGGCATGCAACTGATCGATGCACTGATCGAACAACGCTCGCTGCTGGAGCTGGAAGTGCGCCTGCCG GCGCCGCTGGGCGGCGAACTGCACCTGTGGCTGATGGCCCGCCTGCCGCTGCAGCGCCGCGACTACCAGGCGGTGATCCTCAGCATCAGCGACATCACCA GCCGCAAGCAGGTGGAGCTGTCGCTGCTCGAACGCGAGAGCTTCTGGTCGGACGTGGTGCGTACCGTGCCCGACCAGCTCTACGTGCAGGACGTGCCCAG CCAGCGCATGATCTTCAGCAACCGCCACCTCGGCCAGACCCTGGGCTACAGCCGCACCGAGCTGGCGCAGATGGGCGACCGGTTCTGGGAGTTGCTGCTG CACCCCGAAGACGCCGCGCACTTCCAGGCGCTGCGCCAGCATCAGCGTGAAACCGGCCACAGCGAACCGCTGCACTGCCAGTTGCGCTTCCGTCACCACG ACGGCAGCTGGCGTTGCTACGACATTCGCGAACAGGTGCTGACCCGCGACCCCGATGGCCTGGTGACGCGCATCATCGGCGTGGGCAAGGACGTCACCGT GCAGATCGAGGCCAGCCAGTCGCTGCGCGACAGCGAACAGCGCTACCGCATGCTGGCCGAAAGCATCAGCGATGTGATTTTCTCCACCGACAGCCAGCTG CAGCTGAACTACGTCAGCCCCTCGGTAAAAGCGGTACTGGGCTATCAGGCCGAGTGGATCTTCGACAACGGCTGGCAATCGATCATTGCCAACCCGGCGC AGCTGACCGGTATCTACAGCCTGATGGAGCGCGTCAGCAATGCCATGGGCGACCGCGAGCAACTGGCCCAGCTACGTAGCCAACTGCCGACTCAACTGTT CCTGTTCGACTGCCTGCGTGCCGATGGCCGCAAGATCCCGATCGAACTGCGCCTGGTGCTGGTGTGGGACGATCAGCAGCACTTCGAAGGCGTGCTCGGG GTAGGCCGCGACATCAGCCAGCAACGCCGCGCCGAAAAAGACCTGCGCATGGCCGCAACGGTATTCGAGCACTCCACCTCGGCCATCCTCATCACCGACC CGGCCGGCTACATCGTCCAGGCCAACGAGGCGTTCAGCCGGGTCAGCGGCTATGCGGTCAGCGACGTGCTCGACCAACTGCCCGGCATGCTCACCGTCGA GCAACAGCAGGAAGGCCACCTGCGCTACGTGGTCAAGCAACTGCACCAGCGCGGCAGCTGGGAAGGCGAAGTGTGGCTCAAGCGCCGTGACGGCGACCAT TACCCGGCCTGGGTCGGCATCACTGCAGTGCTGGATGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAGCGCAAGGCCAGCG AACAGCGCATTCACCGCCTGGCCTACTATGACGCCCTCACCCACCTGCCCAACCGCACCCTGTTCCAGGACCGCCTGCACACGGCCCTGCAGCAGGCCGA CCGGCAGAAGGCGTGGGTGGTGCTGATGTTTCTCGACCTGGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCATGCTGCGGGCGATCGCATGCTCAAG GACATGGCCCTGCGCCTGCTGGCCTGCGTGGATGACGACGACACCGTGGCGCGCATGGGTGGCGATGAGTTCACCCTGCTGCTGCAACCGCGCGCAACCC GCGAAATGGCCCTTAACCGCGCCATCCACGTGGCCGAGAACATCCTCGCCAGCCTGGTACGGCCCTTCGTGCTGGAAAACCGCGAGTTCTTTGTCACCGC CAGTATCGGCATCGCCCTCAGCCCGCAGGATGGCAGCGAGCTGAGCCAGCTGATGAAAAACGCCGACACCGCGATGTACCACGCCAAGGAACGCGGCAAG AACAACTTCCAGTTCTACCAGGCGGAAATGAACGCCAGCGCCCTGGAACGCCTGGAGCTGGAGAGCGACCTGCGCCATGCCATGGAGCAGAACGAGTTCA TCCTCTATTACCAGCCGCAGTTCAGCGGCGACGGCAAGCGCCTGACCGGCGCCGAAGCCTTGCTGCGCTGGCGCCACCCGACCCGTGGCCTGGTGCCACC GGGTGATTTTATCCCGGTGATCGAAGAGCTGGGCCTGGTGGTGGATGTCGGCGACTGGGTGCTGCGCGAAGCCAGCCGCCAACTCAAGGCCTGGCACAAG GCCAAGGTGCGGGTGCCGAAGGTGTCGGTGAACATCTCGGCGCGGCAGTTCTCCGACGGCCAACTGGGCACGCGCATCGCCACCATCCTGGAAGAAACCG GGCTGCCACCGGCATGCCTGGAGCTGGAGCTGACCGAAAGTATCCTGATGCGCGAGGTCAACGAGGCCTTGCAGATTCTGGCCAGCCTGAAGAACCTTGG CCTGAGCATTGCGGTCGACGACTTTGGCACGGGTTACTCGTCGCTCAACTACCTCAAGCAGTTCCCGATCGACGTGTTGAAGATCGACCGCACCTTCGTC GACGGCCTGCCCGAGGGCGAGCAGGATGCGCAGATTGCCCGGGCGATCATCGCCATGGCGCACAGCCTGAACCTGGCGGTGATCGCCGAGGGCGTCGAAA CCCATGAGCAGCTGGAGTTCTTGCGCGAGCATGGTTGCGACGAGGTGCAGGGCTACCTGTTCGGGCGGCCGATGCCGGCGCATCAGTTCGAGGCGCAGTT CAGCAACGAGACCCTGTTCATGTTCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCCCTTTGCGCGACCCCGTGTAGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCGGCCCCCGGATATGTGCGGTGACGCTGAAATCGAGGGGCCGC TGCGCAGCCCTTTCGCGACGCAAGGCCGCTCCTACACCACCCACCTCCAACCGCAAAAAAAACGGACTTGAGAGTCAACTCCAGCCCAGTCAGGGCGCGG CTTGCAACATGAGTCCCATTGGTCCGCGACTTGACGTCACTTCATATGCCAGGCGCGAAGCAATCGGTTAGAATGCCCCCCCAATTCAGCCCGATCCTTG AGGACCGCCATGTTCAGCCGTGATTTGACCATTGCCAAGTACGACGCCGAGCTCTTCGAAGCCATGCAGCAAGAAGCTCTGCGCCAGGAAGAGCATATCG AGCTGATCGCTTCGGAAAACTACACCAGCCCGGCTGTCATGGAAGCCCAGGGTTCGGTACTGACCAACAAGTACGCCGAAGGCTACCCAGGCAAGCGCTA
Amino Acid Sequence
>diguanylate phosphodiesterase
MTNLTHPSSLRPASLAPAASLRGSIKGALALLALILLALLLWQLFAQFRHTQADLRKQSLEATAELADHLSLNMALKAQQAVNVVQPYVNAPTPAALPSL LDTLRARLPALRDLAWLDTSGQIRADSLAGSPDRPLIGELLRLNQGRPYFFTNSADNRTLYLLLRQSTEQDRGYWLLRLSGAYYRTLTVHLDNPGHPLWL LENSRSGAVLERHATARTSTAPLQSVMLAFIDNSTWQLRGLFDAELAQQKLLPALIGKCMLVLFCALLPVLALINMRRRQRALQEDRRRYQEIFEGTGVA LCVLDLSSLPGQLDRYHLRNHAALKHSLALDPNLRRSLLQELKITEINQVARQLLNVECHEGAWQRLIDGSGDGRDSIGMQLIDALIEQRSLLELEVRLP APLGGELHLWLMARLPLQRRDYQAVILSISDITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVPSQRMIFSNRHLGQTLGYSRTELAQMGDRFWELLL HPEDAAHFQALRQHQRETGHSEPLHCQLRFRHHDGSWRCYDIREQVLTRDPDGLVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDSQL QLNYVSPSVKAVLGYQAEWIFDNGWQSIIANPAQLTGIYSLMERVSNAMGDREQLAQLRSQLPTQLFLFDCLRADGRKIPIELRLVLVWDDQQHFEGVLG VGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQLPGMLTVEQQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDH YPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQQADRQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK DMALRLLACVDDDDTVARMGGDEFTLLLQPRATREMALNRAIHVAENILASLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGK NNFQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHK AKVRVPKVSVNISARQFSDGQLGTRIATILEETGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV DGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFEAQFSNETLFMFQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site