Pseudomonas sp. WCS358, PC358_RS14170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCCGGTGAAGTAGTCCTGTACGCCGAGCGCGCCGCTGACGTGGTCGCCGGGCTTGTAGTCGGGGTGGTTCGAGACCACCACTTCGCCGACGCCGAGGG CGCGCATTACCTGGCCGAGGCCCACTGGGGGAATGTAGGACTTGCCTTCGTTCATCCAGCCGCGCATGGCGGGGTCGAGGGACAGGTACAGGTTGTGCAC CAGGACCTGGCCTTCGCCGGGCTGTTCGGCGGGCACTTGCTCGAAGCTGAAGTCGTCACGGCGCACGGCGCCGACCGGGCGTTTGGCGAGCAGGAAGCGG CGGTTGGTCTGGGTCATGTCGGGTCCTTGTGGGCAGTGGAAGGTGAAGTGCATTCAATCTACCTTGCTGATGCAACCAGGTGGGTAACATCACTGGTAAG CATGGTAGACCAACCGTTGGCCTGATGATGCTGCCCAGCTTGGCTGGGCGCTGACTATGCTTGGCTGCGATATCACAAATGGCCGCGTCAGGAGCAAACG
DNA Sequence for Gene
>PC358_RS14170
ATGAGCATGACCTTTTCCGGCCAGGTAGCCCTGGTCACCGGCGGCGCTGCGGGTATTGGCCGGGCGACGGCGTTGGCTTTTGCCCGTGAAGGCTTGAAAG TGGTGGTGGCCGACCTCGACCCGGTCGGCGGCGAAGCCACGGTGGGCCTGATCCACGATGCGGGCGGCGATGCGATGTTCATCGCCTGCGACGTGACCCG GGAGGCCGATGTGCGCCAGCTGCATGAACGGCTGATAGCCGCCTATGGCCGGCTGGACTACGCCTACAACAATGCCGGCATCGAGATCGAGCAGGGCCGT TTGGCTGAGGGTAGCGAGGCGCAGTTCGACGCCATCATGGGCGTCAACGTCAAGGGTGTGTGGCTGTGCATGAAGTACCAGCTGCCGCTGCTGGTTGCCC AGGGCGGTGGGGCGATCGTCAATACCGCATCGGTGGCAGGGTTGGGCGCGGCGCCGAAGATGAGCATCTACAGTGCGTCAAAGCACGCGGTGATCGGCTT GACCAAGTCGGCGGCAATCGAATATGCCAAGAAAGGCATCCGGGTGAACGCGGTGTGCCCGGCGGTTATCGACACCGACATGTTCCGCCGTGCGTATGAG GCGGACCCGCGCAAGGCCGAGTTCGCAGCGGCGATGCACCCGGTGGGGCGCATCGGCAAGGTCGAGGAAGTTGCAGGTGCGGTGCTGTACCTGTGTAGCG ATGGCGCGGCTTTCACCACCGGGCATAGCCTGACTGTGGACGGCGGAGCGACGGCGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTTGCGGCGTGTGTGGGTGTAGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCAGCAATCTATGCGGCGAAGCTGAGACCGCGGGGCCGCTA CGCAGCCCGTTCGCGACGCAAGGCCGCTCCTACAATCAGTGGCGTACCTGCACCAGCGGCTTTTCTGGCAAAGCTGCTCGGGCAGACACCACAAGTGCCA GGCCAACCAGCACACACCCCAGCACCAGCACCCCACCAAACACCAGCAAGGCCACCCGCGCGCCCAACCGGTCGCTGAGCAACCCGGTAAAGATCACCGG CAAGCTGAACCCCAGGTACGCCAGCAAGAAGAACCCGGCACTGGCTCGGGTTTTCTCGCTGCCGGCCAGTTGGTTCACCGCCGCCAGGCCGCCCAGGTAG ATAAACCCATAACACGCACTGCTGGCCGCCACGGCGCCCAGCAAGACCGCAGCCAGTTGCCCGCTGTCGGCACCCCAGGCCAGCACCGCGTAGCTGCACG
Amino Acid Sequence
>short-chain dehydrogenase
MSMTFSGQVALVTGGAAGIGRATALAFAREGLKVVVADLDPVGGEATVGLIHDAGGDAMFIACDVTREADVRQLHERLIAAYGRLDYAYNNAGIEIEQGR LAEGSEAQFDAIMGVNVKGVWLCMKYQLPLLVAQGGGAIVNTASVAGLGAAPKMSIYSASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE ADPRKAEFAAAMHPVGRIGKVEEVAGAVLYLCSDGAAFTTGHSLTVDGGATAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site