Pseudomonas sp. WCS358, PC358_RS13120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTTGCAGGGTTTCACGGGCCTGGGTCAGGCGGTCATGGATCTGTCCACGCAATTCGTCAGCCTGATCGCCTGCCAAGTTGGCGGTGTCGGCGAGCAGC TTCTCGGTGTCGCGGACCAAGGCCTGAAAGTCAGCCATCAATATCTCTTGAGCAGTCTTTGCCGATTTGCTGGCCATGGGTCTCTCCCTGTCGATGAGTG TTGGTAGTTCGAGTGATAGCACATGCCGAAGGTTCAAGTGGCTGTGCGGGTAACTGGGCTGGTATGGGCCTTGCTAAGGCTTTGCCACGTAGCGGGGCGC CGCTGGCGTGCACTGCGCCGATTCGGGGCGCCCTGCGTGACGAACTAACGTAAACCTTAACCCAATCCTCGACAAACCCAAGAATAAACCATGCAGGCCT CGCCCCATTCAGCAAACGGGGCAGGGGGCTGGCACCGATTCGGTGCAGGGATGCAGGTTCTTGAACTGTCCTGGTGCCTTTTCAGCAGGTCTGCCTATTC
|
|
| DNA Sequence for Gene |
>PC358_RS13120
ATGGAACACATGCACAGCGCGATGGACTCCCTGGTCCACGGTTCGAATACCCTGTTCATTCTCATGGGCGCCATTCTGGTGCTGGCCATGCATGCTGGCT TCGCCTTTCTCGAAGTGGGCACTGTACGGCACAAAAATCAAGTCAATGCCTTGTCGAAGATTCTCAGCGACTTCGCCATTTCGGCGCTGGTGTACTTCTT TATCGGCTATTGGATCGCCTACGGCGTGAGTTTCTTCCAGCCGGCGGCGCAACTGGCCGTCGACCATGGCTATGCGCTGGTCAAGTGCTTCTTCCTGCTC ACGTTCGCAGCTGCCATCCCGGCGATCATCTCCGGGGGCATTGCCGAGCGTGCGCGTTTTGTTCCGCAGCTGTGTGCCACCGCGTTGATCGTGGCGTTTG TCTATCCGTTTTTCGAAGGCGTGGTGTGGAACGGCAACTTCGGTGTGCAGGCCTGGCTGCACGCACGCTTCGGGGCGCCGTTCCATGACTTTGCCGGCTC TGTCGTGGTGCATGCCATGGGCGGCTGGCTGGCGCTGGCGGCAGTGGTGTTGCTGGGGCCACGGCGCGGGCGCTACCGCGACGGCCGCCTGGTGGCTTTT GCACCTTCGAGCATTCCGTTTCTGGCGCTGGGTTCGTGGATCCTGATCATTGGCTGGTTCGGCTTCAACGTGATGAGCGCCCAGACCTTGCAGGGCGTAA GCGGCCTGGTGGCGATCAATTCGCTGATGGCCATGGTCGGCGGCACCCTGGCGGCCTTGCTGGCCGGGCGCAACGACCCGGGCTTCCTGCACAATGGGCC GCTGGCCGGGCTGGTGGCGATCTGTGCCGGTTCCGACCTGATGCACCCGATTGGCGCGCTGGCCACCGGCCTGGTGGCTGGGGTGCTGTTTGTCTGGAGT TTCACAGCGGCGCAGAACCGCTGGAAAATCGACGACGTGCTGGGCGTGTGGCCGTTGCACGGCCTGTGCGGTGTGTGGGGTGGCATTGCCTGTGGCGTGT TCGGCCAGGCCGCCCTTGGTGGCATGGGCGGTGTCAGCCTGGCCAGCCAGTTGCTGGGCAGTGTTATGGGGGTGCTGGTGGCATTGCTCGGTGGCTTTGT CGTCTATGGGGTGATCCGAGCGCTGCATGGCTTGCGCTTGAGCCACGAGCAGGAGTTTCAGGGCGCGGACCTGTCGCTGCACCGCATTGGTGCAACCAGC CAGGATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGAGGCCAGGTGCGCAGTGGGCGGGACGGACCTAGAATAGGCTTTTCCAAAGCCAAACCGAGAACTGCCCCATGCTGCCTGAATGCCAATTGTTCGGCA CCCTCGGCTGCCACCTGTGCGAAGTGGCCGAGGCTGTGCTGATGCCTTTCGTCGATCATGGCCTGTTGGTGGAGCTGGTCGACATTGCCGATAACGAGGC CATGTTCGAACGCTATGGCCTGATCATTCCCGTGCTGCGTCGCTGTGACAATGGCGGCGAGCTGCATTGGCCGTTCGATGCCGAGCAAGTGGTGGCGTTT CTCGCGCAATGATCGCCCAATGGGCACGCATTCCTCACGCCATGGTTGGGATTACAAGTCGATGATCGGGTGCCGGCCACTGCTGCCGGTGTCCTTGAAC TGTCATCGAGAATCTAACCATGTTCATCACGCCTCATTTCACCCTGGATGAAATGACCGCTTCGAAAATCGCCGCAAGGGAAGGGTTTGACAACACCCCT
|
|
| Amino Acid Sequence |
>ammonium transporter
MEHMHSAMDSLVHGSNTLFILMGAILVLAMHAGFAFLEVGTVRHKNQVNALSKILSDFAISALVYFFIGYWIAYGVSFFQPAAQLAVDHGYALVKCFFLL TFAAAIPAIISGGIAERARFVPQLCATALIVAFVYPFFEGVVWNGNFGVQAWLHARFGAPFHDFAGSVVVHAMGGWLALAAVVLLGPRRGRYRDGRLVAF APSSIPFLALGSWILIIGWFGFNVMSAQTLQGVSGLVAINSLMAMVGGTLAALLAGRNDPGFLHNGPLAGLVAICAGSDLMHPIGALATGLVAGVLFVWS FTAAQNRWKIDDVLGVWPLHGLCGVWGGIACGVFGQAALGGMGGVSLASQLLGSVMGVLVALLGGFVVYGVIRALHGLRLSHEQEFQGADLSLHRIGATS QD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|