Pseudomonas sp. WCS358, PC358_RS12365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCCTCAAAATTCTGCCTTGGGGCAGCGAGCGAAAGAAAAATACTGCAAACCACTTGGCACAAGGCCTACAGGCCATACCCACAAAGTACGCACAACTTA TCCACAGGCGCTCGCCTTGCAAAGACCCCAATACCGCATTATCTTGTATCCCGATCGCAGCGAACCACTAGATGTTGGGGTTCGTGCAAAATCACACACA AAAGTCAACCCGGCAAATTATTCGATTTTACGGTTGAACTTCAGGTGATCTGACCAGCCATACCGCTCCAGCGGAGTACTGAACTGCAACAGCTTTTGGG CTCAGCCCAAAGCCTTTGACTTCGGCCAGGGAGCGGCAAGCTATTGCCCCTTATTCCTGAGTCTGTCCCGAAGTCGGTACACCCGAGCGGGCGGATGCGC GCGCATGACGCATCCCCCGCCAGGTGATCGAGCAAGTGGACGGAACGGTGGGCGCTCAAAAGGCGCCTGTACAATATAGAAACTGTGGAGACACCCACCC
DNA Sequence for Gene
>PC358_RS12365
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGCCCAGGTGCCGCAGGCCGCCGATGCCAACCAGGATCTGGCTGCCACCGCGCCCGGCCAACTGCGCG TGATCAAGCGTAACGGCACTGTCGTCCCCTACACCGACGACAAGATCACCGTGGCCATCACCAAGGCGTTCCTCGCAGTTGAAGGCGGCACCGCCGCCGC TTCGTCGCGCATCCACGACACCGTCGCGCGCCTGACCGAGCAGGTCACAGCCACGTTCAAGCGTCGCATGCCATCGGGTGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGTGAGCAGAAAGTCGCCCGCGACTACGTGATCTACCGCGACCAGCGCGCGAAAGAGCGCGCCA CCCGCGCCAACACCGACGCTGTGGTCGAGCCGCACCCAAGCATCCGCATCACCCTGGCCGACGGCAGCATGGCGCCGCTCGACATGGCGCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCCGAAGTCGATGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCATCAAGGAC GTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTCGAGCGTGAGCCGAACTACTCGTTCGTCACCGCCCGCCTGCTGATGGACACCCTGCGTGCCG AAGGCCTGGGCTTCCTCAGCGTTGCCGACAGCGCCACCCACCACGAGATGGCCGAGCTGTACGCCAAGGCCCTGCCCGCCTACATCGCCAAAGGTATCGA GTTCGAACTGCTGAACCCGGCCCTGGCCGACTTTGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGACCAGCAATTCACCTACCTGGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCACAGGTGTTCTTCATGCGCGTGGCCATGGGCCTGGCGCTGGAAG AGAAAGAAAAAGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGTACCCTGCG CCCGCAGCTGTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCCGGT GGCCTGGGCAACGACTGGACCCCTGTGCGTGCACTGGGCTCCTACATCAAGGGCACCAACGGTAAATCCCAGGGCGTCGTACCCTTCCTGAAAGTGGTCA ACGACACCGCCGTTGCGGTCAACCAGGGCGGCAAGCGCAAGGGCGCTGTCTGTGCCTACCTGGAAACCTGGCACCTGGACATCGAAGAATTCATCGAGCT GCGCAAGAACACCGGTGATGACCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGCGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCGTCGGAAGTGCCAGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACA ACAAGATCAAGGTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAGATGCTGTCGATGCTGTTCGAGACCGGCCACCCATGGCTGACCTTCAAGGA CCCGTGCAACCTGCGTTCGCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCG GTCTGCAACCTGGGCTCGATCAACCTGCCGAACCACATTGTCGATGGCAAGCTGGACACCGCCAAGCTGCAACGCACCGTGAACACCGCCGTGCGCATGC TCGACAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGCGTAACTCGAACCTCAAGCACCGCCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCACTGTACCTGCAGCACATCGCCTACGGCTCCGACGCTGCCGTCGAGTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTATGCGATCCAGGCTTCC TGCGACCTGGCCGACGAGCGTGGCGCCTACGAGACCTTCCAAGGTTCGCTGTGGTCCAAGGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCGAAG CCCGTGGCCAGAAGTACATCGATGTCGACCTGAACGAGACCCTGGACTGGGCACCGGTGCGTGCTCGCGTACAAAAAGGTATTCGTAACTCGAACATCAT GGCCATCGCGCCGACCGCGACCATCGCCAACATTACCGGCGTATCGCAGTCCATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCGGGC GAATTCACCGTGATCAACCCGTACCTGGTCCGCGACCTGAAGGCCCGCGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCGG TGCAGCAGATCGAGCGTATTCCACAAGAGCTCAAAGACCTGTACGCCACTGCGTTCGAAGTCGAGACCAAGTGGATCGTCGATGCCGCCTCGCGTCGCCA GAAGTGGATCGACCAGGCTCAGTCGCTGAACCTGTACATTGCCGGCGCTTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCCTGGTACCGTGGTCTG AAAACTACCTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTCAACGCCGTTTCCAGCGGCGGCGACAGCG CCCCGGTCCAGGCTGCCGGCCCGGCACCAGTGCCGAAAGCTTGCGCCATCGACGAGCCTGACTGCGAAGCCTGCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCTGATGCCGCAAAAGGGGTGCCCACGGGTGCCCCTTTGCGGCATTTTTGTATCTGCGCAGTGGCCGGCTGAACGCGGTTCTGTAGGAGCGGCCTTGT GTCGCGAAAGGGCTGCGCAGCGGCCCCAGGATTTTAGCGTCGCCGCGGGTATCCATGGGGCCGCTACGCAGCCCTTTCGCGACACAAGGCCGCTCCTACA AGAATCGCGCCAGACACAACATAATGTGCTGCTAAAATTAAAACACACCACATGTAGTGCCATGCGCTTTTTGCCGCTACACTTCCACCCCGTAGATGCC GACACAAGCCTCGTGAACGGACGCACCTAAAACCGGTCGAAAAAGTTACCCCCGACCGCCAGACACGCGCCCCGATCGAAGACGAATTCCGGTATACTGC GCCCCCTCTGAAAAGGGCACCCATTCAAGTCCCTGGCCCCTCCCCGAGGCCTGGCCAGGCACACGTCAGATGTAACGAGAGTCAGCCTCTCGAGCTGTCC
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQAQVPQAADANQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDQRAKERATRANTDAVVEPHPSIRITLADGSMAPLDMARLNTIISEACEGLAEVDGDLIQRETLKNLYDGVAIKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLSVADSATHHEMAELYAKALPAYIAKGIEFELLNPALADFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQVFFMRVAMGLALEEKEKEARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTAKLQRTVNTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGIMGFQDALYLQHIAYGSDAAVEFADKSMEAVSYYAIQAS CDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site