Strain | Pseudomonas sp. WCS358 WCS358-Sc1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACCTGTCACGCCACCTGCACGACGACCCTACTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATCATCGCCAGCGACGTCGCAAACTCCCTGGAA AAGCGCCTGGCTGCCCGCCCGGCACACATCGAGCGCCTGCAGCAGCTCAAGGCCGAAGGCCGCGTGGTGCTGGCAGGCCCACATCCGGCCATCGACAGCA ACGACCCAGGTGAAGCCGGTTTCAGCGGCAGCCTGATCGTGGCCGAGTTCGACTCCCTGGCTGCGGCACAGGCCTGGGCCGATGCCGACCCGTATATTGC TGCGGGCGTGTACGACAACGTCATCGTCAAACCCTTCAAGCAAGTCCTGCCTTGACCCGACACCGCGCGGCCCTTTTCGCGGGTAAAGCCGCACCCACAG GGCCGCGCGGTACTGGCGGTTATACGCTTGCCATCAGTCTGCGGTATCTTTGCCACTGGCGGGCCGAATACTCGCCGTCAATGGTTGAATTGAGTGAGTC
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DNA Sequence for Gene |
>PC358_RS11340
ATGAGCGAGCTGTTACTGATTGATGATGACCAGGAGCTGTGCGAGCTGCTCGGCAGCTGGCTGACCCAGGAAGGGTTTACCGTCCGCGCCTGCCACGATG GCCTGAGCGCACGCCAGGCCCTGGCCGAACATGCCCCGGCCGCCGTGGTGCTGGATGTGATGCTCCCAGACGGCAGCGGCCTGGAACTGCTCAAGCAATT GCGCAGCGAACATGCCGACCTGCCTGTGCTGATGCTCTCGGCACGGGGCGAACCCCTGGACCGCATCCTCGGCCTTGAGCTCGGCGCCGACGATTACCTG GCCAAACCCTGCGACCCGCGCGAGCTCACGGCCCGCCTGCGCGCCGTGTTGCGCCGCAGCCACCCGGCAGCCACCACCACCCAGGTAGAGATCGGCGACC TGGTCTACAGCCCGGCACGTGGCGTGGCCAGCATCGATGGCCGCGAGATGACCCTGACCCTGTCCGAAAGCCGCATCCTCGAAGCCCTGCTGCGCCAGCC GGGCGAGCCGCTGGACAAGCAGGAACTGGCGCAGATCGGCCTGGGCCGCAAGCTGACCCTGTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGATCGGGCCGCATGCCGATGGGCGCCCACGCATCGTTGCGCTGCGCAGCCGCGGCTATTACTACAGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGTGCCGGGGCCGCCTCGCAGCCCCAACACGCTCGGCAACTCATCTTTACCCAGCCTTTACCCTCCCCTGACCGCCCTTGACGGTCAGCTGCGTAGACTG TGCTCATCCGGTAACCACCGGCCTATGAAAGGAGAGACACCATGCGCAAGACCCTTATCGCCCTGATGTTCGCCGCCGCCCTGCCGACCGTGGCCATGGC CATGCCTGAAGGCGGCCCGCGTCACGACGGCCCGCATCATCGCGGTGATGCGCCTTTCGCCCAACTGGACCTGAGCCGCGACCAGCGCCAGCAGATTGGC AAGCTGATGGGCGAGCAGATGAAGCAACGCCGCGACATCACCGAGCGCTACCTGTCCAAGCTGCCGGCCGCCGACCAGAAGGCCATGAAGGACGAACTCA AGGCCAGCCGCGACAAGACCGACAGCCAGGTCCGCGGCCTGCTCAAGCCTGAGCAACAGAAGCAGTTCGACGAGCTGCAAAAAGAACGCGCCGCGAAGAA
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDQELCELLGSWLTQEGFTVRACHDGLSARQALAEHAPAAVVLDVMLPDGSGLELLKQLRSEHADLPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPAATTTQVEIGDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQELAQIGLGRKLTLYDRSLDMHVSNLR KKIGPHADGRPRIVALRSRGYYYSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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