Pseudomonas sp. WCS358, PC358_RS10770
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTGGCGTATGTGTTCCAGATACGTCAGTACCGGTCGGGCAAGGGCAAGCGGCCGGAGCCTTTGAAAGACGATCTGCCGATTCCGCCGGATTTGCGGCG TGATGGCTGACAGGCGCCAGGCGATGGGGTTTTGGCGCCTGTGAGATCAAGCGCCGCCCGCGCGGCGCATCGCGACGCAAGGCCGCTCCTACGTTTGTTT CGGGCCAGGGAGGTCTGTGGCATTTGCGCGCGACCGCCTTGTTAGTACGACGCGATATTAGGCGGGCGCCAAAGGGTCGCACGCCAATACCCCAGGAATA ACTGGCCCGAAACAAATGTAGGAGCGGCCTTGCGTCGCGATGCGCCGCGCGGGCGGCGCTCGATCTAACTGCATTCGAAAATCCCACGGCGTACATCCAA ATCCCCGGCGTACATCCAAATAGCAAAGTTGGAAGGCTTCTTGCAAAGCCACGCCCAGGCGCCCCCTGGGCGTCAAAGTTTTGCATCAAGAGGACTCGCG
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| DNA Sequence for Gene |
>PC358_RS10770
GTGGATCGCACTCAGTTAATCAGCAACGCCCGCCACAACCTGGCCGGTCTCGGTCGGGGCAACCTGGGCGTGCCGCTGTTGCTGCTGGTGATGTTGGCAA TGATGATGTTGCCGATACCGCCGTTCTTGCTCGACGTGTTCTTCACCTTCAACATCGCCCTGTCGATCGTGGTGCTGCTGGTCTGCGTGTACGCCCTGCG CCCGCTCGACTTCGCCGCATTCCCCACCATCCTGCTGGTGGCGACCTTGCTGCGCCTGGCGCTGAACGTGGCGTCCACGCGGGTGGTCATGCTCCACGGC CAGGAGGGCCACGGCGCCGCAGGCAAGGTGATCCAGGCCTTCGGTGAAGTGGTCATCGGCGGCAATTACGTGGTCGGTGCGGTGGTGTTCGCCATCCTCA TGATCATCAACTTCGTGGTGGTCACCAAGGGCGCCGGGCGTATTTCCGAGGTAAGCGCACGCTTTACCCTCGATGCAATGCCGGGCAAACAGATGGCCAT CGACGCCGACCTCAACGCTGGCCTGATCGACCAGGCCCAGGCCAAGGCGCGCCGTACCGAGGTGGCCCAGGAGGCCGAGTTCTACGGCTCGATGGACGGT GCCAGCAAGTTCGTGCGCGGCGATGCCATCGCCGGCCTGTTGATCCTGTTCATCAACCTCATCGGCGGCATGCTCATCGGCATGCTCCAGCACGGCATGC CGTTCAGCGAAGCCGGCAAGGTGTATGCCCTGCTGACCATCGGTGACGGTTTGGTGGCGCAATTGCCATCACTGCTGTTGTCCACCGCCGCAGCCATCAT GGTCACCCGCGCCTCGGGCTCGGAAGACATGGGCAAGCTGATCAACCGGCAGATGTTCGATTCGCCAAAGGCGCTGGCGGTGTCCGGCGGCCTGATGATC GTCATGGGCCTGGTGCCGGGCATGCCGCACGTGGCCTTCCTCAGCCTCGGCCTGATGGCCTGCGGCGGCGCCTACCTGGTGTGGAAGAAACAGCAGCAGG TCAAGGCCAAGGCTCAGGCAGAGGTGCAGCGCCAGCAGGACCTGCTGCCCTCGCCGCAGCGTGCGCTGGAAACCAAGGAGCTGGGCTGGGACGACGTTAC CCCGATCGACATGATCGGCCTGGAAGTGGGCTATCGGCTGATCCCGCTGGTCGACCGCAACCAAGGTGGCCAGTTGCTGGCGCGGATCAAGGGCGTGCGC AAGAAGCTGTCCCAGGACCTGGGTTTCCTCATGCCCACCGTGCACATTCGCGACAACCTCGACCTGCAGCCCAGTGCCTACCGCCTGACCTTGATGGGGG TGATTCTGGCCGAAGCGGAGATCTACCCGGACCGCGAGCTGGCGATCAACCCAGGCCAGGTATTTGGCACCCTCAACGGCATTGCCGCGCGCGACCCGGC GTTTGGCCTGGAGGCGGTGTGGATCGACGTTGGCCAGCGCTCCCAGGCGCAGTCGCTGGGCTACACCGTGGTGGACGCCAGTACCGTGGTGGCCACCCAC CTCAACCAGATCCTGCAAAAGCACTGTCACGAGCTGATCGGCCACGAAGAGGTCCAGCAACTGCTGCAGGTGCTGGGCAAGGCTTCGCCTAAACTTGCAG AAGAGCTGGTGCCGGGTGTCATTTCCTTGTCGGGCTTGCTCAAGGTCTTGCAGGCGTTGTTGTCCGAGCAGGTACCGGTGCGCGACATCCGCAGCATCGC CGAGGCTATCGCCAACAACGCCGGCAAGAGTCAAGATACCGCCGCGCTGGTCGCGGCGGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTC GGCGTTGAGTCGGAGCTGCCGGTGATTACCCTGGAGCCAAGGTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAGGGTCAGGAAGACGGTG TTCTTCTGGAACCGAGCATGGCCGAAAAGCTGCAGCGTTCGCTGATTGACGCGGCCCAGCGCCAAGAGATGCAGGGCCAGCCGGCCATTCTTCTGGTCGC CGGCCCGATCCGCGCCATGCTGTCGCGCTTCGGTCGCCTGGCTGTACCGAATTTGCATGTTCTGGCGTATCAGGAAATACCTGACAACAAGCAAGTCACC ATCGTTGCCACCGTGGGCCCTAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGGATAATGCAAGTTAAGCGATTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTCCGGGATGAGCTTGGCTCCGATGCCGCCATCATCGG TAACCGCCGCATTGCCGGTGGTGTCGAATTGACGGCGGCGCTGGACTACAAGCTGTCCGCACTGGCCCCGCGCGTACCCAACGCCGAGCTTGAAGAAGAG CTGCGCAAGACCCACACGCGTATCGCCACGGCCCAGGCCGAACTGGACCAGCGCAGCGACAGCAGCGACAACAACCGCCAATTGTTCGCCGGGCAGTCGC TGACCGCCTCGGAACCCTTGGTCGAGCCGCACGTGGATGCACCGGCGCCTGCCGCTGCGCCCAGCCCGGCGCCGGTCGACCCACGGCTGTTCGATGCCAT GCGCTCGGAGCTGTCGGGGCTGCGCGAGCTGCTGGAAGTGCAACTCGGCTCGCTGGCCTGGAGCCAACTGCAAGGCAGCAAGCCCCAGCAAGCCAACCTC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLISNARHNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKARRTEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMLIGMLQHGMPFSEAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGGLMI VMGLVPGMPHVAFLSLGLMACGGAYLVWKKQQQVKAKAQAEVQRQQDLLPSPQRALETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATH LNQILQKHCHELIGHEEVQQLLQVLGKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIV GVESELPVITLEPRLEQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIDAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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