Pseudomonas sp. WCS358, PC358_RS10315
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTGCCCACCGCATAGAACGGATACCCCAGGCAAACCAGTGCATCCACCCCAAGCTCGTCCGCCACCAGGCTGGCCATGCGCCCGCCCATGGACTTGCC GCCAATGGCCAATGTGCCCGCGACCAAAGGTCGCACCTGCCGGTATACCTCGCGCCAGCACTCCAGCAGAACCTTCTGCGGATTGGGCGGCCGCTTGCCA CCGTTCACGCGGCGTTCGGCCATGTACGGGAACTCGAAGCGAATCACCCCCACCCCAAGCGCCGCAAGCCTTTGCGCCATCTCGTTCATGAACCCGCTGT CCATCGGCGCACCGGCGCCGTGGGCCAGGATCAGGCAGCCTTTGTAGCCCTCATCCCCTTGAATTTGCGGAGGATCGCAGCGCAAGCCTGGGACATTTCC GACCTTCGCCCATTGATCCCCGTCAATACCGGCACTTTGCCCATTAATCATGCTTGCCTCGCTCTATAGCCTGCCAATAACCGTGGATGGGAACCCATAC
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| DNA Sequence for Gene |
>PC358_RS10315
ATGAACACAACCAGCAGTACCGCCTACAACTACAAGGTGGTCCGCCAATTCGCCATCATGACGGTGGTGTGGGGAATCGTCGGGATGGGGCTCGGCGTCT TCATCGCCGCCCAGCTCGCCTGGCCGTCCCTCAACTTCGACCTCCCCTGGACCAGCTTCGGCCGCCTGCGCCCCCTGCATACCAATGCGGTGATCTTCGC CTTCGGCGGCTGTGCGCTGTTCGCCACCTCGTATTATTCGGTGCAACGCACCTGCCAGACCACCCTGTTCTCACCAAAACTGGCCGCGTTCACCTTCTGG GGCTGGCAATTGGTGATCCTGCTCGCGGCCATCAGCCTGCCGCTGGGCTACACCAGCTCCAAGGAATACGCCGAGCTGGAATGGCCGATCGACATCCTGA TCACCATCGTCTGGGTCTGCTACGCCATCGTGTTCTTCGGCACGCTGATGAAGCGCAACACCAAGCATATCTACGTCGGCAACTGGTTCTTCGGGGCATT CATCCTGACCGTGGCGATGCTGCACATCATCAACAACCTCGAGCTGCCGGTCAGCCTGACCAAGTCGTACTCGGTCTATGCCGGCGCCACCGATGCCATG GTCCAGTGGTGGTACGGCCACAACGCGGTGGGCTTCTTCCTGACCGCAGGCTTCCTGGGAATGATGTACTACTACGTGCCCAAGCAAGCCGAGCGCCCGG TGTATTCCTATCGCCTGTCGATCGTGCACTTCTGGGCACTGATCACCCTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCCGACTG GGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGCGCTTGGCATAAG TTGCGCAGCGACCCGATCCTGCGCTTCCTGGTGGTGTCGCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCCATCAAGACGGTCAACG CCGTGTCGCACTACACCGACTGGACCATCGGCCACGTCCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCGATCGGCGCGCTGTACCACACCATCCC GAAAGTGTTCGGCAAAGAGCAGATGCACAGCATCGGCCTGATCAACGCGCACTTCTGGCTGGCGACCATCGGCACCGTGCTGTACATCGCCTCGATGTGG GTCAACGGCATCGCCCAGGGCCTGATGTGGCGCGCGGTCAACAGCGACGGCACGCTCACCTACTCGTTCGTCGAAACCCTGGTGGCCAGCCACCCTGGCT TCATCGTGCGCTTCGTCGGCGGTGCGATCTTCCTCAGTGGCATGTTCCTGATGGCCTGGAACACCTGGCGCACGGTACGCGCGCCGGCCACTGACGCCGC CCCTGCGAACGCCCAGCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGACACGCCTGATGAAACACGAAGTCATCGAGAAAAACATCGGCCTGATGGCGCTGCTGATGGTGTTTGCCGTCAGCATCGGCGGGCTGACCCAGATC GTCCCGCTGTTCTTCCAGGACGTTACCAACAAGCCGGTCGAAGGCATGAAGCCCTACACCGCGCTGCAATTGGAAGGCCGCGATATCTATATCCGCGAAG GCTGCGTGGGCTGCCACTCGCAGATGATCCGCCCGTTCCGTGCCGAGACCGAACGCTATGGCCACTACTCGGTAGCCGGTGAAAGCGTGTGGGACCACCC GTTCCTGTGGGGCTCCAAGCGCACCGGCCCGGACCTGGCCCGCGTGGGCGGGCGCTACTCCGACGACTGGCACCGCGCGCACTTGTACAACCCGCGCAAC GTGGTGCCTGAGTCGAAGATGCCGTCCTACCCGTGGCTGGTCGCCGAACAGGTCGACAACAGCCACACCGAAACCAAGATGCGCACCCTGCGCACCCTCG
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| Amino Acid Sequence |
>cbb3-type cytochrome c oxidase subunit I
MNTTSSTAYNYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPSLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFSPKLAAFTFW GWQLVILLAAISLPLGYTSSKEYAELEWPIDILITIVWVCYAIVFFGTLMKRNTKHIYVGNWFFGAFILTVAMLHIINNLELPVSLTKSYSVYAGATDAM VQWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHK LRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNAVSHYTDWTIGHVHAGALGWVAMISIGALYHTIPKVFGKEQMHSIGLINAHFWLATIGTVLYIASMW VNGIAQGLMWRAVNSDGTLTYSFVETLVASHPGFIVRFVGGAIFLSGMFLMAWNTWRTVRAPATDAAPANAQLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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