Pseudomonas sp. WCS358, PC358_RS09875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCCGGCCAGCGCTTCCTGGAAATCTGGTCGGGGTTGCCGGTGCTGTACCTGCTGATCATCCTCGCCAGTTTCGTGCAGCCCAACTTCTGGTGGCTGCTG GGGATCATGCTGCTGTTCTCGTGGATGAGCCTGGTGGACGTGGTGCGCGCCGAGTTCCTGCGTGGCCGCAACCTCGAATACGTGCGCGCCGCCCGCGCCT TGGGCATGCGCAACGGCGCGATCATGTACCGGCACATCCTGCCCAACGCGATGATCTCGACCATGACCTTCATGCCGTTCATCCTCACGGGCGCCATCGG CACGCTGACCGCCCTGGACTTCCTCGGCTTCGGCCTGCCCGCCGGCTCGCCGTCGCTGGGCGAGCTGGTCGCCCAGGGCAAATCCAACCTGCAGGCGCCG TGGCTTGGCATCAGTGCTTTCGCCGTGCTGGCGGTGATGCTGAGCTTGCTGGTGTTCATCGGTGAATCCGCCCGCGATGCCTTCGACCCAAGGAAATGAC
DNA Sequence for Gene
>PC358_RS09875
ATGAGCGAACACAACCTGATCGAAGTGCGTGATCTTGCGGTGGAGTTCGTCACCGGCGAGCAGGTCAACCGCGTGGTCGACGGCATCAGCTTCGACATCC GCAAGGGCGAGACCCTGGCCCTGGTCGGCGAGAGCGGCTCGGGCAAGTCGGTGACCGCCCACTCGATCCTGCGCCTGCTGCCCTACCCCCTCGCCCGCCA CCCCAGCGGCAGCATCCACTACGAGGGCAAGGACCTGCTGCAGCAGAGCGAGAAGGCCCTGCGGCATATTCGTGGCAACCGCATTGCGATGATCTTCCAG GAGCCGATGACCTCGCTGAACCCCTTGCACTGCATCGAGAAGCAGATCAACGAGATCCTCTTGCTGCACAAGGGCCTGACCGGCAAGCAAGCCACCGCAC GGACCCTGGAACTGCTCGAGCTGGTGGGTATTCCCGACCCCCACAAACGCCTCAAGGCACTGCCCCATGAACTGTCGGGCGGCCAGCGCCAGCGGGTGAT GATCGCCATGGCGCTGGCCAACGAGCCGGAGTTGCTGATTGCCGATGAACCGACCACGGCGCTGGATGTGACCGTGCAGTTGAAGATTCTCGACCTGCTC AAGGAACTGCAGGCGCGGCTGGGGATGGCGCTGCTGTTGATCAGCCATGACCTCAACCTGGTGCGGCGGATCGCCCACCGCGTGTGCGTGATGCAACGTG GGCAGATTGTCGAGCAGGCCGATTGCGCGACGCTGTTCAGTGCGCCGCAGCATCACTACACGCAGATGCTGATCAATGCCGAACCAAGCGGCCAGCCTGC CCACAACCCGGTCGGTGCGCCGTTGCTTGAAGTGGATGACCTCAAGGTCTGGTTCCCGATCAAGAAAGGCTTCTTGCGGCGCACGGTCGACCATGTGAAG GCGGTGGACGGCATCAACTTCAGCTTGCCCCAGGGGCAGACGCTGGGGATTGTCGGTGAGAGTGGCTCGGGCAAATCGACGCTCGGGCTGGCCATCTTGC GCTTGATTTCAAGCCAGGGCGGCATTCGCTTTCATGGCCAGCACCTCGAAGGGTTGAACCAGAAGGAAGTGCGCCCGCTGCGGCGGCAGATGCAGGTGGT GTTCCAGGACCCGTTCGGCAGCCTGAGCCCACGCATGTGCGTGGCGGACATCGTGGGCGAAGGGCTACGGATTCACCGCATCGGTACGGCTGAAGAGCAA GAGGCGGCGATCATTGCGGCGCTGGAGGAAGTGGGGCTGGACCCGCGCACCCGGCACCGCTACCCGCACGAGTTCTCCGGCGGCCAGCGCCAGCGCATTG CGATTGCACGGGCGCTGGTGTTGAAGCCGGCGTTGATTCTGCTGGATGAGCCGACGTCGGCGCTGGACCGGACGGTGCAGCGGCAGGTGGTGGAGTTGCT GCGCAGCCTGCAGCAGAAGTACAACCTGACCTACCTGTTCATCAGCCACGACCTGGCAGTGGTCAAGGCGTTGAGCCATCAGCTGATGGTGATCAAGCAG GGGCAGGTGGTGGAGCAAGGGGATGCGCAGGCCATCTTCCATGCGCCGCAGCATGCGTATACGCGGCAGTTGCTGGAAGCGGCATTTTTGGAAGTTGATA CATCAGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTTTCGAGGCGGCGCAGCTCAAGCCATAGGTGCCGCCAGAGACACTTGAGAATCAGACTTTACCGCTTCCTTGTAGGGCATTTCCAAAACATACCCCTG CCGCCTTTTTGACCTCAAGCAGCAAAATCCCCCAGAACACTCACGCCTGAGGCGGCCCCGCCAACCAATCGCTATACATTTTGGTATATAGCGTTGTAAC GACCGGTAAACAACGCTAGGATTCGTCGCGGTTGGCCTTCTGCCATCCCATCATTATTTTCGAGCGCTGGCTGATCACGTCCTGGGGAGGCCGTGATCCG CCAAGACTCGCCTATCGCTATATACAACAATATATAACGTCGCCAGGTACCGCCAACGCCATGGCCGACAAAGGAGCAGTAATGAAGCCGCTATCACCGC GTACCTTGATGGTTGCCGTCGCAGCCCTCGGTGCACAGCCTGTCCTCGCCGAAGAGAAAAACACCTTCACCCTCGGCGAAATCCAGATTTCCGCACCACG
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MSEHNLIEVRDLAVEFVTGEQVNRVVDGISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIHYEGKDLLQQSEKALRHIRGNRIAMIFQ EPMTSLNPLHCIEKQINEILLLHKGLTGKQATARTLELLELVGIPDPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLL KELQARLGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQADCATLFSAPQHHYTQMLINAEPSGQPAHNPVGAPLLEVDDLKVWFPIKKGFLRRTVDHVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGGIRFHGQHLEGLNQKEVRPLRRQMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAEEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQQKYNLTYLFISHDLAVVKALSHQLMVIKQ GQVVEQGDAQAIFHAPQHAYTRQLLEAAFLEVDTSG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site