Pseudomonas sp. WCS358, PC358_RS00040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS358 WCS358-Sc1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGCGCGCCCACAGAGCGCCGGTGCACCTAAATACTCAAGCGCACCGCCAACGCCGCCAATGTCACCAGCAACACCGGACCGTCAGCAGTACCCCGACC TTGAAGTAATCCCCCCAGCCAATGCTGACCCCTTTGCGCGCCAGCACATGCAGCCCCAGGTTCGACACCACCAGCGGCAGGCTGGCGGTGTCGGCGATGA AACCTGCGCCCATCACGAAGGCCAGAGTCGCGGCAGGCGAGAAGCGCAGCGCCAGCAGCATCGACATGACGAGGTCTCGATGGGCCAAAGAGGCCGCCAC AGAGTAGGGCAAGCTCGGGCGTTTCAGCAAAGTTCCGTTACAAACATGTAAGTTTCGTAAATAAGATTTAAACTCATTTGAGAATCACTATATTTACCAC CCCTATTGACCTCCACATTGTGTTTGCGAGGGCGGTGGGCGAGGGCTCTCCGGCCTGGCAAGGATGTGCCTTTCGCTCATGAACCGCAGGAGATGTACCG
DNA Sequence for Gene
>PC358_RS00040
ATGCAATCCAGAACCTCACCCAACAGCCTGGCCCTGGCGTTCGTCGCGCTGGCCTCGCCGGCCATGGTCGCGACCGCAGCCCACGCCGAAGAGCAACGCA CGGGTGAAGTGCTGGAAGTACCGGCTGCTGAAAATACCCTGGTCATCCAGGACACCCTCGTCACCGCCGAGCGCGAGGCGCGGCAGGCACTGGGTTCGTC GATCATCACCGAAGAAGACATCAAGCGTCACCCTCCGAGCAATGACCTGTCCGAGCTGATCCGTCGCGAGCCCGGGGTCAACCTGACCGGCAACAGCGCC AGCGGTGCGCGCGGCAACAACCGGCAGATCGACCTGCGCGGCATGGGGCCGGAAAACACCTTGATCCTCATCGACGGCAAGCCTTCCAGCGCCCGTAACG CCGTGCGCTACGGCTGGAACGGCGACCGTGACACCCGTGGCGAAACCAACTGGGTGCCGGCTGAAGCGGTCGAGCGCATCGAGATCCTGCGCGGGCCGGC GGCGGCGCGTTACGGCTCCGGCGCCATGGGTGGGGTGGTCAACATCATCACCAAGCGCCCGACCGATGAGCTCAAGGGCAGCGTCAGCCTGTACACGCAG ATGCCCGAAGACAGCGCTGAGGGTGCCAGCCGCCGCGCCAACTTCAACCTGGGCGGCGGGCTCACCGAAAACCTTGGGTTCCGCCTGTACGGTGGCCTGG CCAAGACCGATGCCGACGACCTGGACATCAACGCCAGCCATGCCAACAGTGCGTTGTCGGCTGGCCGCGAAGGCGTGCGCAACAAGGACATCAACGGCCT GTTGAGCTGGAAGCTCAACGATGAGCACCGCCTCGAAGCCAGCGCCGGCTACAGCCGCCAAGGCAACCTCTACGCCGGCGACACCATGAACAGCAACGGT GGCAGCAATGTCGAGCTGATCTCCAGCCTGTATGGCCACGAGACCAACGTGATGCAACGCAACACCTACGACCTGACCCACCTGGGCGACTTCACCTGGG GCACCAGCAAGACCACCCTGGCCTATGAATACGTGCGCAACTGGCGCCTCAACGAAGGCCTGGCCGGTGGCCCGGAAGGCGCGATCAACGACAGCGGCGC GGCCATGTCGCGGCTGCGCAATACACGCCTGAGCAGTGAAGTGAACCTGCCGTTCGCGATGGGCAGCACCGAACATGTGCTGACCCTGGGGGGGGAGTAC CTGTACGAGTCGCTGAACGATCAGGGCTCGTTCCGCCCGCAGAGTTTCGACCCGAGCGGCGGTGGCAACGACGCGATCAGCGGCTTCGATCGCAGCAACT CGAAGATGACCGCCAAGAGCTACGCGCTGTTCGTCGAAGACAACATCATTGTTGGCGACACCACCGTCACCCCGGGCCTGCGCTTCGACCACCACGAAAC CTTCGGCGACAACTTCAGCCCTAGCCTGAACCTGTCGCACAAGCTGACCGAGGCGCTGTCGCTCAAGGGCGGTATCGCCCGGGCCTACAAGGTGCCGAAC CTGTACCAGTCCAACCCCAATTACCTGCTCTACAGCCGGGGTAACGGTTGCAGCGTGCAGCAAACCAACTCCGGTGGCTGCTACCTGCAGGGCAACGCCG ACCTCAAGCCCGAGATCAGCGTCAACAAGGAGATCGGCCTGCTGTACGACCGTGGCACCTGGCGTACCAGCGCGACCTACTTCCGCAACGACTACAAGAA CAAGATCATCGGTGACACCGATGTGCTCTACACCATCAACAGCGGCCGTCGCGTGACCCAGTGGGAGAACGCCGGCGAGGCGCGCGTGGAAGGTATCGAG GGCAACTTCTTCATCGAGCTGACCCCGACCCTGGACTGGAACACCAACCTGACCTGGATGCTCGACAACGACAGCCGCGAGACTGGCGAACCGCTGTCGG TGATCCCGGAATACACGGTCAATACCACCCTCGACTGGCGCGCCACCGACAAGCTGTCGTTCCAGGTCGCGGGTACGTACTTCGGCAAGCAGAAATCGCC GACCTACAACTACCGCACCCAGGAAAGCTACGACCAGGATGCGCAGCAGGATGTGGAAGCCTACGGCCTGGTGGACGTGAGCACGGGCTACAAATTCAAC GCCAACTATGACGTGCGGGTGGGGGTGAACAACGTGTTCGACAAACAGATCCTGCGCGGTGGCAATGCCAGCAGCTCGGGGGCCAATACCTATAACCAAC CGGGTCGGGCGGTGTTTGCCTCGTTGAACATCACCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCCTGGGGCCGCTGTGCGGCCCTTTGCGATCGGTCGGCGCGAAGCAAGGCCGCTCCTGTACGCAGGCGCGGCCTTGCTTCGCGCCCCATCATGACCTTT GAGGGACACCCGATGATCCAAGCCCCCGCCTGGCTGCAGATCCTCTCCCGCAGCGCGGCCGCACTGTTTGGCGGCTACGCGCTCAGCTACGCCGCCAGTG CCTGCCTGGCCCGGTTGTTGCCGCTTTCAGCCGCCGATGCAGTCATTGTCGCGACCCTGCCAGCGTTCGTCTTCTACACCGGCGCAATCCTCTGGGCCTT TGCCAGCCGTGATGCCGTGCGCGCCTGGGCACCCTTGGCCCTCGCCGCACCGCTGGCATTGCTCGGCTTCTGGCCGCAGGCATTGGGGTGGCTGGCATGA AGAATACCTTCACACAATCGATGGCCTGGCTGCATACCTGGGCCGGGCTGATCTTCGGCTGGCTGTTGTTCGCCATCTTCGTCACCGGCACCCTGGCGGT
Amino Acid Sequence
>outer membrane receptor protein
MQSRTSPNSLALAFVALASPAMVATAAHAEEQRTGEVLEVPAAENTLVIQDTLVTAEREARQALGSSIITEEDIKRHPPSNDLSELIRREPGVNLTGNSA SGARGNNRQIDLRGMGPENTLILIDGKPSSARNAVRYGWNGDRDTRGETNWVPAEAVERIEILRGPAAARYGSGAMGGVVNIITKRPTDELKGSVSLYTQ MPEDSAEGASRRANFNLGGGLTENLGFRLYGGLAKTDADDLDINASHANSALSAGREGVRNKDINGLLSWKLNDEHRLEASAGYSRQGNLYAGDTMNSNG GSNVELISSLYGHETNVMQRNTYDLTHLGDFTWGTSKTTLAYEYVRNWRLNEGLAGGPEGAINDSGAAMSRLRNTRLSSEVNLPFAMGSTEHVLTLGGEY LYESLNDQGSFRPQSFDPSGGGNDAISGFDRSNSKMTAKSYALFVEDNIIVGDTTVTPGLRFDHHETFGDNFSPSLNLSHKLTEALSLKGGIARAYKVPN LYQSNPNYLLYSRGNGCSVQQTNSGGCYLQGNADLKPEISVNKEIGLLYDRGTWRTSATYFRNDYKNKIIGDTDVLYTINSGRRVTQWENAGEARVEGIE GNFFIELTPTLDWNTNLTWMLDNDSRETGEPLSVIPEYTVNTTLDWRATDKLSFQVAGTYFGKQKSPTYNYRTQESYDQDAQQDVEAYGLVDVSTGYKFN ANYDVRVGVNNVFDKQILRGGNASSSGANTYNQPGRAVFASLNITF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site