Pseudomonas sp. WCS374, PD374_RS01235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS374. [Details]
DNA Sequence Upstream of Gene
AGGCGAACCCCGGTGCCTCTTGCACGTCCTGCACGAACACGCCCTTGCCCGGCTGCACGTTGACCACGCCCAAAGCGCTGAGGGACGACAGCGCCTCACG CAACGACGCCCGGCTCACCCCCAATTGCAGGGCCAGGTCGCGCTGGGATGGCAGCGCGTCGCCCGGCCCAAAGCCTTGCTCCTTGATCAGTTTGCGGATG GCCTGCAAGGCCGCTTCCGGTACGGCTTGGGCAATGGAATTCATAAAAAGCTCAGGGTTCCCGATAGCGTGTGTGACCCGTTGTAAAACTATTCATAGCT GGCTGCAAGCCACGCCCCAAAGGCGCTCGCGGCTTTTTGCAAACGCTCGAAAAGGGTGCGGGAAATCTGACCACTGTTCAGACCAGTAAGACCACTGCAC CTCAACAAACATCAGCCTTGCAGACGATCCGAACGGTGCTGGCATGGGCTGTGCACTGGGCAAACTCAGAAAATTCCTTCGCCTTTTTCGGAGAGTTGCC
DNA Sequence for Gene
>PD374_RS01235
ATGACCAAGCGCTACAGCGCCCTGCTCACTGCCCTGTTTGCCAGCCTGATGCTGAGCCAGGCACCCGCCCAGGCGAGTGGTCTGGATGACATCGTCGCCC GTGGCACCCTGAAGGTTGCCGTCCCCCAGGACTTCCCGCCGTTTGGTTCGGTCGGCCCTGACATGCAACCCCGGGGCCTGGACATCGACACCGCCAAGCT GCTGGCCGACCAACTCAAGGTCAAGCTGGAACTGACGCCGGTCAACAGCACCAACCGCATACCGTTCCTCACCACTGGCAAAGTCGACCTGGTTATTTCC AGCCTGGGCAAGAACCCCGAGCGCGCAAAGGTCATCGACTTCTCCAACGCCTACGCGCCGTTCTACCTTGCCGTGTTTGGGCCGCCTGATGCCGCCATCG CCAGCCTCGACGACCTCAAGGGCAAGACCATCAGCGTGACCCGTGGCGCCATCGAAGACATCGAGCTGACCGCGGTAGCGCCCAAGGAAGCCACGATCAA GCGTTTTGAAGACAACAACTCCACCATCGCCGCCTACCTGGCCGGCCAGGTCGACCTGATCGCCAGTGGCAACGTGGTCATGGTGGCCATCAGCGAACGC AACCCCAAGCGCGTACCGGCACTGAAGGTGAAACTCAAGGATTCGCCGGTGTACGTAGGCGTGAACAAGAACGAGCCGGCGCTGCTGGAAAAGGTCAACC AGATCCTGGTGGCAGCCAAGGCTGACGGCAGCCTTGGGAAAAACGCGATGCAGTGGCTCAAAGAACCGCTGCCTGCCGACCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGGAGCTCAAAGATGGCCTATCAATTCGACTTTGTGCCGGTGCTGGCCAATACCGACCTGCTCCTGCGTGGCGCGCTGTTCACCCTTGAGCTGACGGC CATTGGCGCCATCCTCGGCGTGGCCCTGGGCACTGTCGGCGCCGTGGTACGGGCGTGGAAGATCCAACCGTTTGCGTGGGTCTTTGGTGTGTATGTCGAG TTGATCCGCAACACGCCGTTCCTGGTGCAACTGTTCTTCATCTTCTTCGGCCTGCCATCCCTCGGGTTGAAAATTACCGAGTGGCAAGCCGCCGTGCTGG CGATGGTGATCAACCTGGGGGCCTACTCCACCGAGATCATCCGTGCCGGCATCCAGGCCATCCCACGGGGGCAACTGGAGGCGGCCGCGGCACTGGCAAT GACGCGCTTTGAAGCGTTTCGCCATGTGGTGCTGCTGCCGGCCCTGGGCAAGGTGTGGCCCGCCCTGAGCAGCCAGATCATCATCGTGATGCTCGGTTCG
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MTKRYSALLTALFASLMLSQAPAQASGLDDIVARGTLKVAVPQDFPPFGSVGPDMQPRGLDIDTAKLLADQLKVKLELTPVNSTNRIPFLTTGKVDLVIS SLGKNPERAKVIDFSNAYAPFYLAVFGPPDAAIASLDDLKGKTISVTRGAIEDIELTAVAPKEATIKRFEDNNSTIAAYLAGQVDLIASGNVVMVAISER NPKRVPALKVKLKDSPVYVGVNKNEPALLEKVNQILVAAKADGSLGKNAMQWLKEPLPADL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site