Pseudomonas sp. WCS374, PD374_RS01275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56935 | Porins | - | - | 41 | 795 | 8.06E-105 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 276 | 784 | 1.2E-42 |
| PANTHER | PTHR47234 | - | - | - | 14 | 795 | 0.0 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 57 | 176 | 6.1E-19 |
| CDD | cd01347 | ligand_gated_channel | - | - | 61 | 795 | 2.21431E-78 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 32 | 180 | 1.3E-28 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 191 | 794 | 6.8E-65 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.