Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
TTGAGGTCGTCGATCATCGCCGCCAGGGTCGTGGACTTGCCAGAACCGGTGGGCCCGGTCACCAGCACCAGGCCGCGAGGAAGGCGGGCGATACGCTGGA ACACCTCGCCCAATCCCAGCGCCTCCAGGCTCTGGACCTCAGTCGCAATAGCCCGGAACACTGCACCCACGCCGCGATCCTGGCGGAACACGTTCGCCCG GAACCGGGCGACGCCTGGCAATTCGAAGGCAAAATCCGTTTCAAGAGATGTTTCGAAATCCTTTTGTTGATGTTTATTCAGCAACGGGCTCAATAAGTCG ACCACTTGGGTAGCGTCCAGCGCTGGCCCATCCAGCGGCCAAACCTCGCCATCAATGCGCAGCATCGGTGCCAGGCCGGCTGACAGATGCAGGTCTGAGG CGCCTCGGCTTACGCTGGCCGTCAGCAATTGCGTGATATCCATAGGGCTTTCCATTTCCAGTAGAATGCCGCGGACTCCATATCCACGGGCGCATCTTGA
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DNA Sequence for Gene |
>PD374_RS01865
ATGTCGACGATAGCAGACAACATCGGCCTGGTTAGCCAGCGCATCCGCGCCGCAGCCGACGCCGTGCAACGTGACGCAAGCAGCATCCACCTGCTGGCCG TGAGCAAGACCAAACCCGCGCAGGCAGTGCGCGAAGCCTATGCCGCCGGGCTGCGCGACTTTGGTGAAAACTACCTGCAGGAAGCCCTGGGCAAACAGGC GGAATTAACCGACCTGCCCTTGAGTTGGCACTTCATCGGCCCCATTCAATCGAACAAGACTCGCGCCATCGCCGAGCACTTCGCTTGGGTGCATTCCGTG GACCGCCTGAAAATCGCACAACGCCTGTCCGAACAACGCCCGGCCGACCTGCCGCCGCTCAATATCTGCATTCAGGTCAATGTCAGTGGCGAAGCCAGCA AGTCCGGCTGCACACCCGCCGACCTGCCGGCCCTGGCCACGGCGATCAGCGCCCTGCCGCGCTTGAAGCTGCGGGGCTTGATGGCGATTCCCGAGCCGAC TGAAGATCGGGCAGAGCAGGATGCGGCGTTTGCCACGGTGCGCGACCTGCAAGCCAGCTTGAACCTGGCGCTGGACACACTTTCCATGGGCATGAGCCAC GACCTTGAGTCGGCCATTGCCCAAGGCGCCACCTGGGTGCGGATCGGTACCGCGCTGTTTGGCGCCCGCGACTACGGCCAGCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATGGCTGACATCCCTCGAAAATAAGGACCTGTCATGAGCAACACGCGTATTGCCTTTATCGGCGCCGGTAACATGGCGGCCAGCCTGATCGGTGGCCTG CGGGCCAAGGGCCTGGACGCCGAGCAGATCCGCGCCAGCGACCCGGGCGCCGAGACCCGCGAGCGCGTCAGCGCCGAACACGGCATCCAGACCTTCGCTG ATAATGCCGAGGCCATCCACGGCGTCGATGTGATCGTACTGGCGGTCAAGCCCCAGGCCATGAAGGCTGTGTGCGAGAGCCTGCGCCCGAGCCTGCAACC TCACCAACTGGTGGTGTCGATTGCCGCTGGCATCACCTGCGCCAGCATGACCAACTGGCTCGGCGCCCAGCCCATCGTGCGCTGCATGCCCAACACCCCG GCGCTGCTGCGCCAGGGCGTCACCGGTTTGTATGCCACCGGCGAAGTCACCGCGCAGCAACGTGACCAGGCCCAGGAACTGCTGTCTGCGGTGGGCATCG
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Amino Acid Sequence |
>hypothetical protein
MSTIADNIGLVSQRIRAAADAVQRDASSIHLLAVSKTKPAQAVREAYAAGLRDFGENYLQEALGKQAELTDLPLSWHFIGPIQSNKTRAIAEHFAWVHSV DRLKIAQRLSEQRPADLPPLNICIQVNVSGEASKSGCTPADLPALATAISALPRLKLRGLMAIPEPTEDRAEQDAAFATVRDLQASLNLALDTLSMGMSH DLESAIAQGATWVRIGTALFGARDYGQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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