Pseudomonas sp. WCS374, PD374_RS02430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
CCCACCCGCTGCAAGCCCTGGTGTCGGAGCCGATCAAGCCGATTATCGACAGCGTGATCATGTCCAACGCCGTGCACGGTTACATCAGCCAATCCGACAA GGGCGACCTGGTGATCGGCGCCGGTATCGACGGCTACAACGGTTACGGCCAGCGCGGTTCGTACCCGGTGATCGAGCACACCATCCAGGCCATCGTCGAG ATGTTCCCGGTGCTGTCACGGGTGCGCATGAACCGCCAGTGGGGCGGCATCGTCGACACCACGCCGGATGCCTGCCCGATCATCTCCAAGACCCCGGTAC CGAACATGTTCTTCAACTGCGGTTGGGGTACGGGCGGCTTCAAGGCCACCCCAGGCTCAGGCAACGTGTTTGCCGCCAGCCTGGCCAAGGGTGAAATGCA CCCACTGGCCGCACCTTTTTCCATCGACCGTTTCCACAACGGTGCGTTGATCGACGAACACGGCGCTGCGGCCGTCGCCCACTAACAGGAGAAATTCCCT
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| DNA Sequence for Gene |
>PD374_RS02430
ATGTTGCATATCTTCTGTCCTCACTGTGGCGAACTGCGCTCCGAAGAGGAATTCCACGCGTCCGGCCAAGCGCACATCCCGCGCCCGCTAGACCCGAATG CCTGCACCGACGAGCAGTGGGGCGACTACATGTTCTTTCGCGATAACCCGCGCGGCCTGCACCACGAACTGTGGATCCATGCCGCCGGTTGCCGCCAGTA TTTCAACGCCACCCGCGACACTGTGACCTACGAAATTCTTGAAACCTACAAGATCGGTGAGAAGCCTCAGTTCACCGCCAAGGCCTCTGGAGAGAAGGTA TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAGATCAATCGCCTGTCCAACGGTGGCCGCATCGACCGTAATAAAGTCCTGACGTTTACGTTCAACGGTCAGAGCTACAAGGGCTTTGAAGGCGACAC CCTGGCTGCCGCCCTGCTGGCCAACGGTGTCGACATCATTGGCCGCAGCTTCAAATATTCGCGCCCACGGGGCATCTTTGCCGCGGGCGCCGAAGAGCCG AACGCGGTGCTGCAGATCGGCGCCACCGAAGCCACGCAGATCCCCAACGTGCGCGCCACCCAACAGGCGCTGTACCAGGGCTTGGTTGCTACCAGCACCA ACGGCTGGCCGAGCGTGAACAACGACATGATGGGGATTCTCGGCAAGGTCGGCGGCAAGCTGATGCCGCCGGGTTTCTACTACAAAACCTTCATGTACCC GCAATCGTTCTGGATGACCTACGAGAAGTACATCCGCAAGGCGGCGGGCCTTGGCCGCTCGCCCACCGAGAACGACCCGGACACCTACGACAACTTCAAC
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| Amino Acid Sequence |
>sarcosine oxidase subunit delta
MLHIFCPHCGELRSEEEFHASGQAHIPRPLDPNACTDEQWGDYMFFRDNPRGLHHELWIHAAGCRQYFNATRDTVTYEILETYKIGEKPQFTAKASGEKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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