Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
AGAGTCACCGAGCACGGCATTGGCCTGGGCCAGTACCCACTCACGGTCAAGCACGCGGAAATCACTGACATTGACAGTATTTTGCACGGTCAACGCGGTG ACGGCCGGGGCCGCGTGGCAACCCTGGGCGAGCAGGGCTTCGATATCTGCCTGCAGGCCGGCGCCACCACTGGGGTCGTGGCCGGAGAGACAGAGGACAA CGGGGCGAGAGCTGTAGATATTCATGGTGCGCGAGCTTACCACCAAACGCTTTTTGCGTGGCTGCCTGGCGATGGCAGGAGTTTGCCGCTGCGGCGCGAT TTGCCGTGGCTGAGCGCTGCACTGAGATGAGCTGAAAGCATTGCCCTAGAGCTGTCCTAAAAAAAGTTCCCACGGTGGCTAATGGCTTTTACTGGCTATG CTAAAGTGCATCCAAACAACTTACTGTATCGCCGGTGTACGTCTTCTCAAAAGGAATGGGGGGCTTTTGACACAACCGGACCAGGCTACGCTGGGGCTCT
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DNA Sequence for Gene |
>PD374_RS03715
ATGCGCTATTTGCTGATTTTTTTATTGTGCGGGCTGCCGATGCTCGCCAGCGCCGTCGAGTTCAACCAGGACACGCGAAGCCTCCCGTTGGGCCGGGTCA TGCAAGTGCTCGAAGACCCAACCGATGCCCTCACCATCGCCGATGTCAGTTCCCCCGCCTATGCCGCCCAATTCAAGACCCACGACAAAGACACGCTCAA TGCCGGCTATTCACGCTCGGTGTTCTGGCTGAAGGTCAACCTGCACTACACCGCCAAAGATCCCCGGGCACCACGCACCTGGTTTCTGGAACTGGCCTAC CCGCCGCTCAATCGCCTGGACCTTTACCAGGACGACGGCACTGGTCACTTCCGCCTCACCACCCGCACCGGCAGCGCGTTGCCGTTTTCCAGCCGTGAGG TGAGCCAGAGCAACTACCTGTTCAAGCTCAGCTTCTTGCCCGACCAGCAACAAACCGTCTACCTGCGCTTGCAAAGCCAAGGCTCGATCCAGGCACCGCT GACATTATGGGCCGGCACCGCCTACATGGAGGAGCAGCCGCTGCGCTTGTACGTGCTCGGCGCCATCTACGGTGTGTTGCTGGGCATGCTGATCTACAAC CTGTTCATCTACCTGAGCGTGCGCGACACCAGCTACCTGTATTACATCCTCTATATCGCCTCGTTCGGCTTGTATCAGCTGTCGGTCAATGGCGTCGCGG TGGAGTACTTCTGGCCGAACAACCCGTGGTGGGCGAATGCGGCGGTGCCCTTCCTGATCGGCTCGGCGGCCTTGTTCGGCAGCCTGTTCGCGCGCAGTTT CCTGCACACCGCGCAGCACAGCCGCTGGCTCAACCGTATCCTGCTGGCGCTCGCGGCCTGTGGAGGGTTGGTGATGGCACTGGCGTTGTTGACCAGTTAC GCCGTGGCCCTGCGCCTGGCCACTGCGCTGGCGCTGGTGTTTACCGTGACCATCTTCGTGGCGGCCATCAAGGCCTGGTATTGCGGGCAGCGCATGGCGC GTTATTTCATCATCGCTTGGTCGGCTTTCCTGCTCGGCGGGGTGGTCAACACCCTGATGGTGCTGGGTTACCTGCCTAACGTGTTCCTGACCATGTACGC CAGCCAGCTCGGCTCAGCCATTGAAGTGGCGCTGTTGTCCCTGGCCCTGGCCGACCGCATCAATGGCATGCGTGAACAGCAGGCGCAGATTCTCCTCGAT GCCAGCCAGAAGCTGGAAGCGCTCAACCAGCAACTGGCCCGCAGCAATCGTCTCAAAGACGAATTTCTCGCCACCCTGACCCACGAATTGCGCACGCCGA TGAACGGTGTGATCGGCTCGCTGGAGCTGATGCAAACCGTGTCATTGGACGATGACCTGACGCAGTACCAGCAAACCGCCGCCGGCTCGGCGCGGGACAT GATGCGCATGGTCAACGGCATCCTCACCCTCACCGAATTGCAGGCCGGTCGCCTGGTGGCCCAGCCGCAAGTGTTCAGCCTGCGCGGCACGCTCGATACC TTGCGCCAGCAATTCACCGGCAGCGCCCAGAGCAAAGGCCTGGCGTTCTCCATTGATGTGGCCGATGAGGTGCCGGACCGGCTGATCGGCGATGCCGACA AACTGCTCCAGTGCCTGGATTGCCTGCTCGATAACGCCTTCAAATTCACCCACGTCGGCGCGGTGCGCTTGCGAGTGGTGGGCGTGCCCCAAGGGGATGG CGCCTTGCACCTGAGCTTTATCGTCACCGACACCGGTATCGGCTTCGCCTTTCTCGATGAGGCCACGCTGTATCAGCGTTTCTTTCAGTTGGACGGCTCG ATGACGCGTGAATACGGCGGCCTGGGCATTGGCCTGGCGATCTGCCGGCAGTTGATCGAACTGCTGGGCGGGCGCCTGACCCATCATTCTGAGCCCCGTA AAGGCAGTCGCTTCCAGTTGGAAGTGGACGTCAGCGCCGTGCCGCAGCAGGTGACGCCCGCCACGCAAACGCTGCCTGCACAGCGTGCGCCTCAGGAGTG CACGGTACTGTTGGTGGACGACAACAGCGTAGGCCAACTGGCGGTGCGTGGCATGTTGCTCAAGCTCGGTTACCGGGTCAAAACCGTGGACAGCGGCCCG GCGGCACTCGCTGCATTGCAAGGGCATAGCTTCGACGCCGTGCTGCTGGATGTGCCAGAGGGTGGCTTTTCGTTGTGCTGTCAGATTCGCGCATTGCCTG GCTGCGGTGAATTGCCGGTGATCGCCCTGAGCTCTTCGCCCAATGGGCCGGAGCGTGAGCGCTGCCATGGCATTGGCATGACGGATCGGCTGGCCAAGCC GGTGCGTTTCGATGCTTTGCAGGCGGCACTTGAACGTAGCGTGCTGTGCGCGGATGAGGGTGAAAGCGCCGAACATTCGGCGCGTATGCCACTTTTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTCTTGCACGGTGCTTAACTGAATTCCGGGCCACTGTTCATGCGGCCTTTTTTCCAGGAGGCCCGTCATGAACCTGCATCAGTTTGCCGAAACCCACGA CGTCACCAACCAGCCACCGTCCCTGGACGGCACCAACCTGTATCGCATCGACTTGCCTTTGCAGGAATGGTCACGCCGCTTTGGCGCCGGCTGGGCCCAA GCGCGCATTGATGCCTACGGCGCGCTGGCGGGTGGGCCGTTGATGGCAGCCGGCTTCCTGGCCAACCAGAACAAACCGGTGTTCAGCAGCCATGACCGTT ATGGCCATCGCATTGACCTGGTTGAGTTTCACCCGGCTTATCACGAGCTGATGCGCACCGCCGTCGAGCATGGCCTGCCGTCGTTGCCGTGGGCCCATCC CCAGGCGGGCGCCCATGTGGCGCGTGCGGCAATGACCTACCTGCACAGCCAGGCCGAGGCCGGCAGCGGCTGCCCGCTGACCATGACCTTCGCCTGCGTC
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Amino Acid Sequence |
>histidine kinase
MRYLLIFLLCGLPMLASAVEFNQDTRSLPLGRVMQVLEDPTDALTIADVSSPAYAAQFKTHDKDTLNAGYSRSVFWLKVNLHYTAKDPRAPRTWFLELAY PPLNRLDLYQDDGTGHFRLTTRTGSALPFSSREVSQSNYLFKLSFLPDQQQTVYLRLQSQGSIQAPLTLWAGTAYMEEQPLRLYVLGAIYGVLLGMLIYN LFIYLSVRDTSYLYYILYIASFGLYQLSVNGVAVEYFWPNNPWWANAAVPFLIGSAALFGSLFARSFLHTAQHSRWLNRILLALAACGGLVMALALLTSY AVALRLATALALVFTVTIFVAAIKAWYCGQRMARYFIIAWSAFLLGGVVNTLMVLGYLPNVFLTMYASQLGSAIEVALLSLALADRINGMREQQAQILLD ASQKLEALNQQLARSNRLKDEFLATLTHELRTPMNGVIGSLELMQTVSLDDDLTQYQQTAAGSARDMMRMVNGILTLTELQAGRLVAQPQVFSLRGTLDT LRQQFTGSAQSKGLAFSIDVADEVPDRLIGDADKLLQCLDCLLDNAFKFTHVGAVRLRVVGVPQGDGALHLSFIVTDTGIGFAFLDEATLYQRFFQLDGS MTREYGGLGIGLAICRQLIELLGGRLTHHSEPRKGSRFQLEVDVSAVPQQVTPATQTLPAQRAPQECTVLLVDDNSVGQLAVRGMLLKLGYRVKTVDSGP AALAALQGHSFDAVLLDVPEGGFSLCCQIRALPGCGELPVIALSSSPNGPERERCHGIGMTDRLAKPVRFDALQAALERSVLCADEGESAEHSARMPLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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