Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
CTGTTTACCTATCTGGCAGACGATGCCACCTTGCGCACCCTGACGTTCTGGAACCTGGGCAGCCTCAATGGTGCAAGTTATTCGCGGTTGTGGCCCTTGT TGCTGGTGAGTGCGGGCGTGGCGCTATGGTTGCCGCGCCGGGCCAAGGCGCTGAACGCGCTGTTGCTGGGTGAGTCCGAGGCCAAGCATCTGGGTGTTGA TGTCGAGGGGCTCAAGCGCGAGTTGGTGTTCTGCACGGCCTTGGGCGTTGGCGCCGCAGTGGCAGCGGCGGGCATGATTGGTTTTGTCGGGTTGGTGGTA CCGCATCTGGTGCGGCTGCTGGCTGGGCCGGATCATCGGGTGTTGTTACCGGCCTCGGTGTTGGCGGGTGCGAGCCTGCTGCTGTTTGCGGACCTGGTGG CGCGCCTGGCGTTAGCGCCGGCGGAACTGCCGATCGGTATTGTCACCGCGTTTATCGGTGCGCCGTTTTTCCTCTATTTATTGTTACGAGGGCGCGCCTG
|
|
DNA Sequence for Gene |
>PD374_RS04405
ATGTTGCGGGTAGAAGCGTTGCAGATCCGGCGCGGTGGTAAGACCGTGCTCGCCGATATCACCTTGGACCTATTGCCGGGCGAAGTGCTGGGCGTTCTGG GCCCCAATGGCGCCGGCAAAAGTACCTTGCTTGGAGCGCTGTGCGGGGAGTTGCAGCCGGATCAGGGCAAGGTGTGGCTGGATCAGCAGGCGCTCAAGCA CATGACAGGTGTGCAGCGTGCCCAGCGCCTGGCGGTGCTGCCACAATCCTCCACCCTGGACTTTGCCTTTCGTGTCGAAGAGGTGGTGGGCATGGGCCGC TTGCCTCATCAGACCGGGCGAGTGCGCGACGACGAAATCATCAACGCCGCGCTGCAGGCTGCTGATGTAGGCCACCTGAGTGGCCGCAGTTACCTAGCCT TGTCGGGCGGCGAGCGGCAGCGTGTGCACCTGGCACGGGTATTGGCGCAGTTATGGCCGGGTGAGGCAGGGCAGACGTTGTTGCTGGATGAGCCCACATC GATGCTCGACCCTCTGCACCAACACACCACCTTGCAAGCTATCCGGCATTTTGCCGACAGAGGCGCTGCGGTGCTGGTCATCCTGCATGACTTGAACCTG GCGGCGCGTTACTGCGACCGGATCCTGTTGCTGGAAAACGGCCGCCCCCACGCGCTGGATACGCCCTCTAACGTCCTGCAACCAGAGCCGCTCAAGGCTG TATTCGGTCTGGATGTATTGGTACAGCCGCATCCGGAGCGTGGGCATCCGTTGATCATTGCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCCGGTTAATTCGCGGGCAAAAAAAGACCCGGCAAGAGCCGGGTCAAATAACCGTGATTAGCCTGATGAGGAGATAATCTGAGAGTCCGAACCAATGGT CTTTCAGTTATCGGCTGATCTCGCGACCAGTTGTGATAATCATAACGATTCTCATTTGAGAGTCAACATCTGTTTTTCTGCTTCATCCATTTTTCTCAAA CGCTCGTTTGTAATGCCCGTAAACACTGGGTTTGAGTGCCACTCTAGTTCTTCTGATGCACTGAGATCGCTTCAAGCTGACGGTTCAAGGCCTCCTTGCG CTCCGTGGGTATGTCGTTCCAGTGCACATCCATCAATGCCCCTTCAATCGCATACAGCAGAACCTTCGAGGCTCGAAACCCGCGCGTGCGCACGGCTCGG TAGGCATCGACCGCCCCCAGCCGACGCAAGTCGGACGCGCTGTGGATGCCCACCGCATGCAGCCACTGCGCTGACGTCTTGCCAAGGTTTTTCAGGTGTT
|
|
Amino Acid Sequence |
>hemin ABC transporter ATP-binding protein
MLRVEALQIRRGGKTVLADITLDLLPGEVLGVLGPNGAGKSTLLGALCGELQPDQGKVWLDQQALKHMTGVQRAQRLAVLPQSSTLDFAFRVEEVVGMGR LPHQTGRVRDDEIINAALQAADVGHLSGRSYLALSGGERQRVHLARVLAQLWPGEAGQTLLLDEPTSMLDPLHQHTTLQAIRHFADRGAAVLVILHDLNL AARYCDRILLLENGRPHALDTPSNVLQPEPLKAVFGLDVLVQPHPERGHPLIIAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|