Pseudomonas sp. WCS374, PD374_RS05710 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
GATCAGCGATGCCGACCAGCCAATGGGCGTGCCGTCATCTTGTACCACGCGCAGCCCCATGACCTGCTTGCCTGGCGAGCAGCCCTGGTTGAGCACTTCG AACAACACCATGTACCACCAGCTCACCAGGAACAGCAGCAGCGAACCCAGCCCGATCCCCACATTGCCGAGCAGCGCCAGCGGCACCAGCAGGATACCCA TGATGATCCCGCGCACGCCCAGGTCGAATGCAAACGCCAATGCCCGGGAGGGCAGGCCAGCAGGGCGCAGGGGCAGGTCGATGCCCTCGGGCGTTTCTAT CTGATAGTGGGTATCCAGAGGGGTTGATGGCATTGCGATCCTTGGCACTGCGAGGCGACTTGAGAGACACGGATGCTAGCAGTGTCGAGGATGGAAGCAA CCACCCGAGGTTTTTCTGGATATTTATACAGTAAGGTATCGCTGGCCCCGGACGCCTTGCAGCGCCTAGACTTTGTCGGTCTTCAGCACAGGAATAGCCC
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| DNA Sequence for Gene |
>PD374_RS05710
|sbcB
GTGACCTCGATTTTCTGGTACGACTATGAAACCACCGGCATCAACCCGCGCAACGATCGCCCGCTCCAGGTAGCCGGTATCCGCACCGACCTTGAACTCA ATGAGGTCGGTGCGCCGATCAACCTTTATTGCCAGCCCAGCGACGATATCCTGCCTCATCCGGCAGCGTGTGCGATCACGGGTATTACGCCGAGTATCCT CGCTGAGAAGGGCCTTGCCGAAGCCGATTTCATGACTCGGGTGCACGCCGAATTGGCCGCGCCAGGTACCTGCGGCGCCGGCTACAACACCCTGCGATTC GACGATGAAATGACGCGCTACAGTCTGTACCGCAATTTTTTCGACCCCTATGCGCGCGAGTGGCAGGGCGGCAACAGTCGCTGGGACTTGATCGATGTGA TGCGCACCGCCTACGCCCTGCGGCCGGAGGGCATCAACTGGCCCGAGCAGGACGGGCGTGTGACCCTCAAGCTCGAACGCTTGACAGAGGCCAACGGCAT AGACCACGGCCAGGCCCATGACGCGTTGTCGGATGTGCGTGCAACCATCGCCCTGGCGCGGTTGGTCCGGGAGAAACAACCGAAGTTATATGAATGGTTG TTTCAACTGCGCAGTAAACAACGGGTCATGGATCAGGTGCGGTTGCTGCAACCGATGGTGCATATCTCCGGGCGTTTCTCCGCCGAACGCCATTACCTGG GCGTGGTCTTGCCCCTGGCCTGGCACCCACGCAATCGCAATGCCTTGATCGTCTGTGACCTGGGGCTCGATCCGCAAGGGCTGTTGGACCTGGATGCGGC GACCCTGCGCCAGCGTCTTTACACGCGCCGCGATGAGCTGGCCGAAGGTGAGCTGCCGGTTCCGCTCAAGCTACTGCATATCAACCGCTGCCCGGTGGTT GCGCCGTTGAAGGTGCTGCGCCCGCAAGATCTTGAGCGCCTGCAACTGGATAAGGAGGCTTGCCTCGCGCGGGCGCTGCGACTAACTGACGCACAGGAAG TTTGGCGGGACAAGTTAGCGGCCATTTATGCCGAGGAAGACTTTGCGTCGAACGCGGACCCGGAGCAGCAGCTCTACGAGGGTTTTATTGGTGATCGTGA CCGCCGTTTATGTGAGCAAGTTCGCATGGCAGAGCCCGCGCAATTAGCCCGTCAGCAGTGGCCGTTCGATGATCATCGTTTGCCGGAATTATTATTTCGC TACCGGGCGCGTAACTTTCCTGAAACCTTGAACAATGACGAGCAACAACGCTGGAAACTTTTCTGTCAGCAACGTTTGTCGGAGGCGCAGTGGGGGGCGC CGAATACCCTGTTGGCATTTAAGCAGGCGCGTGAGGAGTTGGCGGTTAGTGCTACATCGTTTCAGTGCCAGGTGCTGGCGCAATGGCAGGACTATGTGGA TTCATTAGCGGCGCGCTTGAGTCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCATAACTACAGAATATTCAGACAATAAAAAACGCCAGCAAGCTGGCGTTTTTCATGTGTGACGTATCGGGTGAACGTCCGACCGGGCTTAGCCCAGC AGGGTTGCCCAACCTTCAACTACGTCACCGCCCCACTTGGCTTTCCACTCTTTCAGAGTTTTGTGGTTGCCACCTTTGGTTTCAATCACTTCGCCGTTGT GTGGGTTTTTGTATTGCTTGACCTTGCGAGCACGCTTGGTGCCGGTAGTTTTCACAGCGCCGCGCGGTGCTTTAACTTTCGACTCTGGATCCAGCAGCGC GATGATGTCACGCAGGGATTTGGAGTATTCACCCATCAGGGTGCGCAATTTGCCTTCGAATTCCAGCTCGGTTTTCAGCTTGTCGTCTTCGGACAGGTTC TTCAAACGGGCTTGCAGCTCTTTGATAGCTTCTTCGGTGGCGCGGTATTCGTTGATCAGTGACATGTGGACTACCTTATGTAGAACGCTGATTGACAGGG
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| Amino Acid Sequence |
>exonuclease I
MTSIFWYDYETTGINPRNDRPLQVAGIRTDLELNEVGAPINLYCQPSDDILPHPAACAITGITPSILAEKGLAEADFMTRVHAELAAPGTCGAGYNTLRF DDEMTRYSLYRNFFDPYAREWQGGNSRWDLIDVMRTAYALRPEGINWPEQDGRVTLKLERLTEANGIDHGQAHDALSDVRATIALARLVREKQPKLYEWL FQLRSKQRVMDQVRLLQPMVHISGRFSAERHYLGVVLPLAWHPRNRNALIVCDLGLDPQGLLDLDAATLRQRLYTRRDELAEGELPVPLKLLHINRCPVV APLKVLRPQDLERLQLDKEACLARALRLTDAQEVWRDKLAAIYAEEDFASNADPEQQLYEGFIGDRDRRLCEQVRMAEPAQLARQQWPFDDHRLPELLFR YRARNFPETLNNDEQQRWKLFCQQRLSEAQWGAPNTLLAFKQAREELAVSATSFQCQVLAQWQDYVDSLAARLSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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