Pseudomonas sp. WCS374, PD374_RS06745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCGGAAACCATCTCCGTCGGAGTGGTGGATGCCGAAACGGCACACAAGGCGGTTTCGCTGCGCGTGTTGACCGTGGACGACTCTTCGGTGGCGCGCAA GCAGGTCACGCGTTGCCTGCAAACCGTCGGGGTGGAGGTGGTGGCCCTCAATGACGGACGCCAAGCCCTGGATTACCTGCGCAAGCTGGCGGACGAAGGC AAGAAGCCCGAAGAAGAATTCTTGATGATGATCTCTGACATCGAGATGCCGGAAATGGATGGCTATACGCTCACGGCCGAGATACGTAACGATCCACGCA TGCAAAAATTGCATATCATCCTGCATACTTCGTTGTCGGGGGTATTCAATCAGGCAATGGTCAAGAAGGTCGGTGCGGATGACTTTCTGGCCAAATTCCG TCCTGATGACCTCGCATCCCGGGTAGTCGACCGGATCAAGGCAGCAGATCACGGCTAGGGGATGTCCCCCGGCGGTCACACGATTTAAGAGGCGGCATCA
|
|
| DNA Sequence for Gene |
>PD374_RS06745
TTGTCTACGGGTAATTTGGATTTCGAACAGTTCCGGGTCTTCCTGGAAAAAGCCTGTGGCATATTGCTCGGTGAAAACAAGCAGTACCTGGTATCCAGCC GTCTCAACAAGCTGATGGAACAGCAGGGCATCAAGTCCCTGGGTGAGTTGGTCCAGCGGATCCAGGGGCAGCCGCGCAGTGGGCTCAAGGAAATGGTGGT CGATGCCATGACCACCAACGAAACCTTATGGTTTCGCGATACCTATCCCTTTGAAGTGCTCAAGAACAAAGTGTTGCCCGAAGCCATCAAGGCCAGCCCG GGCCAGCGCCTGCGTATCTGGTCGGCGGCCTGTTCTTCGGGGCAGGAGCCGTACTCGATCTCGATGTCCATCGATGAGTTCGAGCGGACCAACATGGGCC AGTTGAAAGCCGGTGCGCAAATTGTGGCCACGGACTTGTCCGGCACCATGCTCACCAACTGCAAGACCGGTGAGTACGACAGCCTGGCCCTGGGCCGAGG TTTGTCCCAGGAACGCCTGCAACGCTACTTCGACCCCAAAGGGGCAGGGCGTTGGGCGATCAAGGCGCCGATCAAGAACCGCGTCGAATTTCGCTCTTTC AACCTGCTCGACAGCTACGCCAGCCTGGGCAAGTTCGACATGGTGTTCTGCCGCAACGTGCTGATCTATTTCTCGGCTGAAGTGAAGAAAGACATCCTGT TGCGCATCCACGGCACGCTCAAGCGCGGAGGTTATCTGTTCCTCGGTGCTTCCGAGGCGCTCAATGGGCTGCCGGATCACTTCCAGATGGTGCAATGCAG CCCGGGGATCATCTACCAGGCCAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCTGGGGTATGCAATAAAACTGTGGGAGCCGGGCTTGCCCGCGATGGCGTTGTGTCAGTCGATGAATTGGTCGGCCCCGCCATCGCAGGCAAGCCAGCTC CCACATTTTTTTCTCGGCAAGCTGGCGTAAAGCGGCAACTGCCCATTGCCGCTTTAATGGCGCTACGCGGAAATCGCTTGCCGCTTTTCTGGCATAGCCG CCGTCGACTCCCCTCCAAACCCTTGATATAGGGGCTCTCGCAAGATTGGCATGCACCTTGCTATAACCCTGCTAACGAACAGCAGGTCAGCCTAAAGGTT TCCGCCATGAGCATCAGCTTCGATAAAGCGCTCGGTATCCACGAACAAGCCCTGGGCTTCCGCGCCCAGCGTGCCGAAGTCCTGGCCAACAATATTGCCA ACGCCGACACCCCGAACTACAAGGCTCGGGACCTGGACTTCTCCGCCGTGCTCGCCGCACAGCAGGACAAGACCAAGAACGGCACCTTCGCCTTGAACAT
|
|
| Amino Acid Sequence |
>chemotaxis protein CheR
MSTGNLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGELVQRIQGQPRSGLKEMVVDAMTTNETLWFRDTYPFEVLKNKVLPEAIKASP GQRLRIWSAACSSGQEPYSISMSIDEFERTNMGQLKAGAQIVATDLSGTMLTNCKTGEYDSLALGRGLSQERLQRYFDPKGAGRWAIKAPIKNRVEFRSF NLLDSYASLGKFDMVFCRNVLIYFSAEVKKDILLRIHGTLKRGGYLFLGASEALNGLPDHFQMVQCSPGIIYQAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|