Pseudomonas sp. WCS374, PD374_RS07660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS374. [Details]
DNA Sequence Upstream of Gene
TCAGCGTGATCTGCCGCGACGCCGGCGGTTTCAAAGGCCCGGCACTCTTGCAGAACATCCTCGAAAGCGGCCTGCGTTTTGGCGAGATGGATATCTTCCA TCGTCACGAAAGCATGGCCGGTAACGGCGAAGTGCTGTTCTCCATGGCCAACGCGGTCAAGCCGGGCACGTTCGATCTGGACGATATCGACCTGTTCAGC ACCCCGGCGGTGAGTTTCTTCCTTGGTCTGCCAGGCCCGCGTCACCCCAAACAAGCGTTCGACGTGATGGTGGCCGCCGCCCGCAAGCTGTCCCAGGAAC TCAACGGCGAGCTCAAGGACGACCAACGCAGCGTGCTCACCGCCCAGACCATCGAACACTACCGTCAGCGCATCGTCGAGTTCGAGCGTCGCGCCCTGAC ACAGAAACGCTGAGGAACGATCTTAAGCGTTGTCTGTAGAATCCGTGCACTAACATATTGAGCAGCTTCGGCTGCTCTTTTGCTTTATGAGAGAACACCC
DNA Sequence for Gene
>PD374_RS07660
ATGACCGCCGCCCATACCCGCATCCTCGAACTGCGCGCTGAACTGGATCAGCATAACTACCGCTACCACGTCCTCGACGAGCCGAGCATCCCGGACGCCG AATACGACCGCCTGTTCCACGAGCTCAAGGCCCTGGAGGCCGAGCACCCGGAGCTGGTGACGCGTGATTCGCCGACGCAGCGGGTCGGCAGTGCGGCATT GTCGGCGTTCACCCAGGTCAAGCACGAGATCCCGATGCTCAGCCTGGGCAACGCCTTCGATGAAACCACCATGCTGGAGTTTGATCGCCGGGTCACCGAG GGCCTTGACCTGCCGGTGGGCGATCTGTTTGGCGCTGGCGCGGCGGTGGAATACAGCTGCGAGCCGAAGCTGGATGGCCTGGCGGTCAGCCTGTTGTACC AGGATGGCGAGCTGGTGCGCGGTGCCACCCGGGGCGACGGCACCACGGGCGAGGACATCAGCGTCAACGTGCGCACCGTGCGCAATATCCCCCTGAAACT GCACGGCACGGGCTGGCCAGCCACCCTGGAAGTGCGCGGTGAAGTGTTCATGTCCAAGGCCGGTTTCGAGCGGTTGAACGCCTCGCAACTGGAAGTGGGT GGCAAGACCTTCGCCAACCCGCGCAACGCTGCGGCGGGCAGCCTGCGCCAACTGGATTCGAAGATCACCGCCAGTCGCCCGCTGGAGTTCTGCTGCTATG GCATCGGCCAGGTGACCGCGGATATCAGCGACACCCATATCGGCAACCTCAAGCAGTTGCAGAAGTGGGGCATGCCGATCAGCCACGAGTTGAAGCTGGC CAAGGGCATCCAGGAATGCCTGGACTACTACCGCGACATCGGCGAGCGCCGCAATGCGCTGGGCTATGAAATCGACGGCGTGGTGTTCAAGGTCAACAGC ATTGCCTACCAGCGTGAACTGGGCTTCCGTGCCCGCGAGCCGCGCTGGGCGATCGCGCACAAATTCCCGGCCATGGAAGAACTCACCGAGCTGCTCGACG TGGAATTCCAGGTCGGCCGCACCGGTGCGGTCACGCCGGTGGCGCGCCTCAAGCCGGTCAAGGTGGCCGGTGTGACCGTGTCCAATGCCACCCTGCACAA CATGGACGAAGTGGCACGCTTGGGGCTGATGATCGGTGACACCGTGATCATCCGCCGCGCCGGTGATGTGATTCCGCAGGTGGTCTCGGTGGTCACCGAA CGCCGCCCGGAAAACGCCCGCGCTGTGCAGATCCCGCAAAATTGCCCGGTGTGCGGTTCCCATGTGGAGCGCACGCAGTTGGTCAAGCGCAGTAAGGGCA AGGAAACCGTCAGCGAAGGCGCGGTGTACCGTTGCGTCGGGCGTCTGGCCTGCGGTGCGCAACTCAAGCAGGCCATCATTCATTTCGTCTCGCGCCGGGC CATGGACATCGACGGCCTGGGCGACAAGACCATCGAGCAACTGGTGGATGAACAGCTCATCGGCTCGCCGGCCGATCTCTACAAGCTCAAATACGAACAG ATCATCGACCTGGAAGGCTTTGCCGATACCTCCAGCAAGAAGCTGATCAGCGCCATCGAAAACAGCAAGACCCCGACCCTGGCACGCTTTATCTACGCCT TGGGCATTCCCGATGTGGGCGAGGAGACGGCCAAGGTGCTGGCGCGCTCGCTGGCGTCCCTGGAGCGTGTTCAAAAGGCGTTGCCAGAGGTGCTGACGTA CTTGCCGGATGTTGGGCTGGAAGTGGCCCATGAGATCCATAGCTTCTTTGAAGACGGGCACAACCAGCAGGTGATTGGCGCGCTGTTGTCGCCAGACGAA TGCGGCCTGCAATTGCAGGAGCAGGGCGAACTCAGCGCGGAATTCGCCGCCAGCACCACCTTGGGCGGTTTGCTCGACAAGCTGCACGTGCCTTCGGTGG GACCGGGCGCGGCGCAGAAGCTCGCGGACAAGTTCGGTTCGCTGGAGGGCATCATCAAGGCTGACTGGCTCGATATGCGCCAGGCGCTGCCCGAGAAGCA AGCCAAGGCTGTACGGGAGTTTTTCGACAATGCCGACAACGCCAACCATGCCCTGGCCATCGAGCAGCAGCTCAAGGACTTCGGCATGCACTGGCAGAGC GAGAAAAAGGTCGTTGAAGGCTTGCCCGAAGCCGGGCACACCTGGGTACTCACCGGCTCCCTGGAGTTGATGAGCCGCGATGTGGCCAAGGACAAGCTCG AAAGCCTGGGGGCCAAGGTGGCCGGTTCCGTTTCGGCGAAAACCCACTGCGTGGTGGCGGGACCGGGCGCCGGCTCGAAATTGGCCAAGGCCAATGAGCT GGGCCTGAAAGTACTGGACGAAGAGGCCTTCGTCGCCTTCCTGGCCAAGCACAACATCACCGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGATCGTCCCCACGCTCCGCGTGGGAACGCATCCTGTGACGCTCCGCGTCACGGCCTTCGCGCAGACGCAGAGCGTCCAAGGCGGCATTCCCACGCGGA GCGTGGGAACGTTCTCTCCCGAGAAATGATCTAGTCTCTGTCACCCCAGGGAGAGATCGCCATGTTCCGCTACTTCGAGCAACTCAGCACGCGCATCGCC GCTCCGTTCATGGCCGAAACCTCGCGCAACAGCAAGGTGTGGCGATGCCGGTGTGGCCAGTCGCTGTTCTTTCGCAACAGCCAATGCCTGGCCTGCCAGG CGGCGTTGGGTTACCAGCCGCAGCAAAGCCGCCTGTCGTCCCTGCAACCTGGGCCGGTGGTCGGTACTTGGCTGGCCGACGACAATCTTGATGCTGGCGC TTTTCGGCGCTGCGCCAACCTCGACTCACCGGCTGCGTGCAACTGGCTGATTCCTGCCCACAGCACCGCGCCGTTGTGCGTGGCCTGTAGCCTGAACCGC
Amino Acid Sequence
>NAD-dependent DNA ligase LigA
MTAAHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPELVTRDSPTQRVGSAALSAFTQVKHEIPMLSLGNAFDETTMLEFDRRVTE GLDLPVGDLFGAGAAVEYSCEPKLDGLAVSLLYQDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGTGWPATLEVRGEVFMSKAGFERLNASQLEVG GKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGIGQVTADISDTHIGNLKQLQKWGMPISHELKLAKGIQECLDYYRDIGERRNALGYEIDGVVFKVNS IAYQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVSVVTE RRPENARAVQIPQNCPVCGSHVERTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVDEQLIGSPADLYKLKYEQ IIDLEGFADTSSKKLISAIENSKTPTLARFIYALGIPDVGEETAKVLARSLASLERVQKALPEVLTYLPDVGLEVAHEIHSFFEDGHNQQVIGALLSPDE CGLQLQEQGELSAEFAASTTLGGLLDKLHVPSVGPGAAQKLADKFGSLEGIIKADWLDMRQALPEKQAKAVREFFDNADNANHALAIEQQLKDFGMHWQS EKKVVEGLPEAGHTWVLTGSLELMSRDVAKDKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGLKVLDEEAFVAFLAKHNITV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site