Pseudomonas sp. WCS374, PD374_RS08130
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
GACGAGGCGTTCATTGACGTGACCCCGGACTTGAGCCTGGCCAGCCATGCCGATCAGGTCGGCTTGATCGTACTGCGCTCATTCGGCAAGTTCTTCGGCT TGGCCGGCGTGCGCCTGGGCTTTGTGCTGGCCGAGCGCAAGTTGCTCAAGCTGTTGGCCGAACAGGTCGGGCCCTGGGCCGTCAGTGGGCCGACGCGGGT GTTGGGCCAAGTGTGCCTGCGCGACACCGACGGGCATGCGCGCCAGCGCAGTCGTTGCATCGCAGCCGGCCAGCGTCTGTTCGAGTTGCTTGAGCGCCGT GGGCTTCAACCGCACGGCGGCTGCGCATTGTTCCAGTGGTTGATTACCCCCCACGCTGAACGGCTGTACGAATTCATGGCCCAACGCGGCATCCTGCTGC GCCTGTTCGTGCACAACAGCAGCGTGCGCTTGGGCCTGCCCGACACCGACGCCGACTGGCTGCGCCTTGATGAAGCCCTGGCCGCCTACAAGGACGCCAC
|
|
| DNA Sequence for Gene |
>PD374_RS08130
ATGACCACGTTGATGGTGCAGGGCACCACCTCCGACGCCGGTAAAAGCACCCTGGTGACTGCGCTGTGTCGCTGGCTGGTACGCCAAGGCGTCGCGGTGG CACCGTTCAAACCGCAGAACATGGCGCTCAACAGCGCGGTGACCGCCGAAGGCGGCGAGATCGGCCGCGCCCAGGCGGTGCAGGCCCAGGCTGCCAACCT GGCGCCCCATACCGACATGAACCCGGTATTGCTCAAGCCCAACAGCGACACCGGCTCCCAAGTGATCATCCATGGCCGTGCGGTCACCAGCATGAATGCC GTGGCCTATCACGACTACAAAGCCATTGCGATGCGAGCGGTGCTGGCCTCCCACGCGCGTTTGAGCCAGGCCTACCCGGTGGTGATGGTCGAAGGCGCGG GCTCACCGGCCGAGATCAACCTGCGCGCCAATGACATTGCCAACATGGGCTTCGCCGAGGCGGTGGACTGCCCGGTGCTGTTGATCGCGGACATCAACCG CGGCGGCGTGTTTGCCCATCTGGTTGGCACCCTGGAGCTGCTGTCGCCCAGTGAACAGGCGCGGGTCAAGGGCTTCATCATCAACCGTTTTCGCGGCGAT ATCGCGTTGCTGCAACCAGGGCTGGACTGGCTCGAAGCGCGCACCGGCAAACCGGTCGTCGGCGTGCTGCCCTACGTGATGGACCTGCACCTGGAGGCGG AAGACGGCATCGACCAGCGCCAGATCGACAAGGCCGCCCAAGTGCTCAAGGTGGTGGTGCCGGTGCTGCCGCGCATCAGCAACCATACCGACTTCGACCC GCTGCGCTTGCACCCCCAGGTGGACTTGCAGTTCGTCGGGCCGGGCCAGGCGATACCTGCCGCTGACCTGATCATCCTGCCGGGCTCGAAAAGCGTGCGC AGTGACTTGGCCTATCTGCGTGCCAATGGCTGGGAAACCGCCGTGGCGCGGCATCTGCGTTATGGCGGCAAGGTACTGGGGATCTGCGGCGGCTTGCAGA TGCTCGGCGAGCAGGTCCATGACCCGCTGGGTCTGGAAGGGCTCGCGGGCTCCAGTGCCGGCCTTGGGTTGCTGGCGTTCAGCACCACCCTGGAACAAGA GAAACAACTGCGCAATGTGCGTGGGCGTCTGGTATTGGAAGATGCCGACGTCAGCGGTTATGAAATCCATGCGGGGGTGACCTGCGGCGCTGCCTTGGCA AGCGCTGCGGTCCTGCTGGACGATGGCCGCAGCGATGGCGCGCAGAGCCCTGATGGGCAAATTCTAGGCACCTACCTGCACGGCCTATTCGAGACCCCGG CTGCGTGCAGCGCGTTGCTGCGTTGGGCCGGGTTGCAGGATGTGCAAGAGGTGGATTATCACGGCTTGCGCGAGCGCGATATCGAGCGGTTGGCGGACTT GGTGGAGCACCACTTGGACACCGATTTGTTGCGCAAGCTATGTGGGATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGGTGTTCACACCATCCAACTGTGGGAGCTGGCTTGCCTGCGATAGCCATGTGTATCTACACAACGCTGTAGTGCTCAACGGTAACCACGATGCGAAGCG AGCCGCCCTTGATCTTGATCTGCTTTTGATCTTGATCTTAGGCGGCCCCCCAAATCACTGGCGGATTACGGGCACACCGAGCCTGGGCGAGGTGCCGAGT GGTGGGGCAAGAGCGTTTTGCTTACTTTTGCGCTTTTCAAAAGTGAGCCGCTGTAAAAGCGGAACCCTAAGTGGCCGTTACCGCAGAAATGGATATGTAC ACGGTCCAACTGTGTTGACTGTCAGGCCGTCTTCGCAGGCAAGCCAGCTCCCACATTTGGGTCGCGGTGCGTCAGCTGGATCAGCGTCGGCTGTCAGGCC GTCACGGGAGCAAGCTCCCTCGCCACATCATTTGCCAGGGGCCTTTGCATGTATCAATTGATCCTCGGCGGTGCCCGTTCGGGTAAGAGCCGCCTGGCCG
|
|
| Amino Acid Sequence |
>cobyric acid synthase
MTTLMVQGTTSDAGKSTLVTALCRWLVRQGVAVAPFKPQNMALNSAVTAEGGEIGRAQAVQAQAANLAPHTDMNPVLLKPNSDTGSQVIIHGRAVTSMNA VAYHDYKAIAMRAVLASHARLSQAYPVVMVEGAGSPAEINLRANDIANMGFAEAVDCPVLLIADINRGGVFAHLVGTLELLSPSEQARVKGFIINRFRGD IALLQPGLDWLEARTGKPVVGVLPYVMDLHLEAEDGIDQRQIDKAAQVLKVVVPVLPRISNHTDFDPLRLHPQVDLQFVGPGQAIPAADLIILPGSKSVR SDLAYLRANGWETAVARHLRYGGKVLGICGGLQMLGEQVHDPLGLEGLAGSSAGLGLLAFSTTLEQEKQLRNVRGRLVLEDADVSGYEIHAGVTCGAALA SAAVLLDDGRSDGAQSPDGQILGTYLHGLFETPAACSALLRWAGLQDVQEVDYHGLRERDIERLADLVEHHLDTDLLRKLCGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|