Pseudomonas sp. WCS374, PD374_RS12295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS374. [Details]
DNA Sequence Upstream of Gene
TCGTTAGCAGCGACGCGGCAACACGCCGGGGCCAAGGGCGAACAAGCCGCCAAGGTCATGGTGGCGATGCTCAACGACACCACCTATGCACGGGCCGGTC GCGTGGATTTTCTGGCCAACTCGGCTGACCGCAAGACCGGCACGGTGCGCGTGCGTGCGGTGGTGGAAAACCCGGATGGGCGCTTGACGCCGGGGCTGTT CGCCAAGGTCAAGCTGGACACCGGCGCGGCGCAACCCCGGGTGTTGATTGCCGACCATTCCATCGGCACCGACCAGGGCCGTCGCTATGTGCTGGTAGTC GGTGAAGGTGATAAAACCGAATACCGCCCGGTGGAACTGGGCCCAGTGGTCGACGGCCTGCGGGTCATCGAACAGGGGCTGCAACCGGGCGAGCGCATTG TCGTCAAAGGGCTGGTGCGCCCCGGCATGCAGGTGACACCGCTGGCTGCCAGCATCGAGGGCAAGCCGCTTGAGGCGCCGCTGGCGGTGGGGGGCGTGCA
DNA Sequence for Gene
>PD374_RS12295
ATGAGCTTCCCACGCTTTTTCATTGACCGACCGATCTTCGCCATTGTCCTCTCGGTGTTGATGATGATCGGCGGCATCGTGGCCTTCTTCCATTTGCCGT TGAGCGAATACCCGGCCGTCACGCCGCCCACGGTGCAAGTGACCGCGTCGTATCCGGGGGCCAACCCGCAGGTGATTGCCGAGACGGTGGCAGCGCCGCT GGAACAGGTGATCACCGGGGTCGAGGGCATGCTTTACATGACCTCGCAGTCGGCCACCGATGGCCGCATGATCCTGACCGCGACCTTCGCCCAGGGCACC AACGCGGACATGGCGCAGATCCAGGTGCAGAACCGTGTTTCGCGAGCTTTGCCGCGCTTGCCCGAAGAGGTGCAGCGCCTGGGCGTGGTCACGCAGAAGA CCTCGCCGGACATCCTCATGGTGGTCCACCTGCTGTCCCCCGACCAACGTTATGATCCGCTCTATATCTCCAACTATGCCTACCTGCAGGTGCGCGATGA GTTGTCGCGCCTGCCGGGGATCAACGATGTGCTGGTGTGGGGCGCGGGTGAATACAGCATGCGCCTGTGGCTCGACCCGGACCTGATCGCCGCCCGTGGC TTGACCGCCGGTGATGTGATTGCTGCCGTGCGCGAGCAGAACGTGCAAGTGGCCGCCGGCTCGGTCGGCCAGGCGCCGGACTCTACTGCGGCGTTCCAAG TCACGGTCAATACCCTCGGGCGCCTGACGGACGAAGAGCAGTTCGGCGATATCATCATCCGCACCGGCGATAACGGCCAGGTCACGCGCCTGCGTGATGT GGCCCGTATAGAGATGGGCGCCGATGCCTACGCGCTGCGCAGCCTGTTGGACGGCGAGCCGGCGGTGGCCTTGCAGATCATCCAGAGCCCAGGGGCCAAT GCCCTCGATGTGGCGCAGTCGGTGCGCGAGACCATGCAGCGTCTGCAAACCAACTTCCCCGAGGGGCTGGTGTCGCGGATTGCCTATGACCCCACCGTGT TTGTGCGCGCTTCGCTGGAGTCGGTGGCCATCACGCTGATGGAAGCGATCCTGCTGGTGGTGATCGTGGTGGTGGTGTTCCTACGCAACTGGCGTGCGTC GCTGATTCCTTTGATGGCCGTGCCGGTGTCGATCATTGGCACCTTTGCGGTCATGCACCTGATGGGCTTTTCCCTCAATACCTTGTCGCTGTTTGGCCTG GTGCTGTCGATTGGCATCGTGGTCGACGATGCAATCGTGGTGGTGGAGAACGTCGAGCGGCATATCGAGAACGGCGAGGAGCCGATGCAGGCTGCGCGAC GGGCGATGGGCGAGGTCACCGGCCCTATCATTGCGATCACCTCGGTGCTGGCGGCCGTGTTCATTCCCACCGCGTTTCTCAGTGGCCTGCAAGGCGAGTT CTATCGGCAATTTGCGCTGACCATCGCGATTTCCACTATCCTCTCGGCGGTCAACTCGTTGACCCTCAGCCCGGCGCTGGCTGGCCTGTTGCTGCGGCCA CGGCATGCGGCCTTGGTGCATGACCCGCGCAGCCTGCGTGGTCGCGCCACGCGGCTGCTTGAGGTGCTGGGCCGGCCGTTTCAGCGAGCGCCACAAGCCT ATGGCAATACCGTGCGCAAGGTCGTCGGCCGTCGCGGCGTGGCACTGTTGGCCTACGGCGGTTTGCTCGCGTTGACCTGGTTCGGCTTCAACGCGGTACC GGCCGGCTTCGTGCCGATGCAAGACAAATACTACCTGGTCGGCATCGCCCAACTGCCGAACGCGGCCTCGTTGGAGCGTACCGATGCGGTGGTGCGACAA ATGTCGAAAATCGCCCTGGATGAGCCGGGGGTCGAGAGCGTCGTGGCGTTCCCGGGGCTGTCGGTCAACGGCTTCGTCAACGTCCCGAATGCGGCGGTGA TGTTTGTGATGCTTGATCCGTTCAAAGAGCGCACCTCGCCGGATATGGCGGCGGTCGCCATCGCCGGGCGTCTGCAAGCCAAGTTTGCGAGCATCCCCGA CGGCTTCCTCGGCGTGTTCCCGCCGCCACCGGTGCCGGGGCTCGGGGTGACCGGGGGCTTCAAGCTGCAGGTCGAGGACCGTGGCGGCGTCGGGCTGGAG GCGCTGGTGCAGCAGACCCAGGTACTGATGACCAAAGCCACTGAGTCAGGCCAAGTGGCCGGGCTGATGACCAGCCTGGACGTCAATGCGCCGCAACTGA ATGTCGACATCGACCGCACCCAGGTCAAGAGCCAGGGCGTGCGCCTGGCGGATGTGTTCGAGTCGCTGCAGGTCTATCTGGGGTCGCTGTACGTCAATGA CTTCAACCGGTTTGGCCGCACCTACAAAGTCACGGCCCAGGCCGATGCGGACCATCGCATGCAGGCCGAAGCCATCGGTCGTCTGCAGGTGCGCAATGCC GCCGGGGACATGCTGCCGTTATCAGCGTTTGTCACGGTCACGCCGAGCTCCGGGCCTGACCGGGTGATTCACTACAACGGCTATCCCTCGGCGGATATCT CTGGCGGCGCGATGCCTGGGGTCAGCTCAGGGCAGGCGGTTGCGCTCATGGAACGCCTGGCCCAGGAGGTACTGCCCGAGGGCGTGACCTATGAATGGAC AGACCTGACCTACCAGCAAAAGCTCGCCGGGTCATCGGCCCTGTTTATTTTCCCGCTGTGTGTGTTGCTGGCGTATCTGATCCTCGCCGCGCAGTACAAC AGTTGGCTGCTGCCGTTGGCGGTGTTGCTGATCGTGCCCATGTGCCTGCTCAGCGCAATCCTCGGCGTGTGGCTGGTGGAGGGCGACAACAACGTGTTCG TGCAGATCGGGTTGGTGGTGCTGGTGGGCTTGGCTGCGAAGAACGCCATCCTGATCGTCGAGTTTGCCCGCAGCCTCGAAGCCGAAGGCGCCAGCCCATT GGAAGCGGTGATCCACGCCTGTCAATTGCGCCTGCGCCCGATCCTGATGACGTCCCTGGCGTTTATCGCCGGCGTAGTCCCGCTGGTATTTGCCAGTGGG GCAGGCGCCGAGATGCGCCATGCCATGGGGGTTGCGGTGTTTGCCGGGATGTTGGGCGTGACGCTGTTCGGTCTGTTCCTGACGCCCGTGTTCTATGTGG TGATGCGCAGCCTGGCGCTGCGCGTGCAGCGCCAGGGGGCGAGTCCGAAGGTGCAGCTAAAGGAGAGCGCATCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACAGGCGTATCCAGCTTTTCTGTTGTCGTTGACCCTGCTGGCCGGTTGCGGCTCGGTTGGGCCTGATTACTCCGCGCCGGTGCTGCCTGCTGCGCAGCG GGCGACGAGCTTCGGCGCGCCCATCGCCGGGCTTGGTCCGGGCGAGGTAGAGGTGCAGTGGTGGCAAGTGTTCGACGAGCCAGCACTGAGCCAATTGATC CAACGGGCACTGGCGGCCAACCACGACATCGGCATCGCCGCCGCGCGCCTGGACGAAGCCAAGGCGTTGCTGCGCGAAAGCCGCCAAGGCTTCCTGCCCA GCGGCGGCGCTGCCCTGGGCTACGAGCACCGCCAGCGTAGCGAGGTCGAGACTCCCTTCGGCGAGCAGCGCTCTATTGAAACCACCCGCGCGGCGGTGGA TGCAGCCTGGGAAATCGACTTGTTTGGGCGCGTGCGTCGCTCGGTGGAGGCGGCCCAGGCCCAGGCGGGGTCGCGTCAGGCATTGCTGCGCAGCGTGCAA
Amino Acid Sequence
>RND efflux transporter
MSFPRFFIDRPIFAIVLSVLMMIGGIVAFFHLPLSEYPAVTPPTVQVTASYPGANPQVIAETVAAPLEQVITGVEGMLYMTSQSATDGRMILTATFAQGT NADMAQIQVQNRVSRALPRLPEEVQRLGVVTQKTSPDILMVVHLLSPDQRYDPLYISNYAYLQVRDELSRLPGINDVLVWGAGEYSMRLWLDPDLIAARG LTAGDVIAAVREQNVQVAAGSVGQAPDSTAAFQVTVNTLGRLTDEEQFGDIIIRTGDNGQVTRLRDVARIEMGADAYALRSLLDGEPAVALQIIQSPGAN ALDVAQSVRETMQRLQTNFPEGLVSRIAYDPTVFVRASLESVAITLMEAILLVVIVVVVFLRNWRASLIPLMAVPVSIIGTFAVMHLMGFSLNTLSLFGL VLSIGIVVDDAIVVVENVERHIENGEEPMQAARRAMGEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAVNSLTLSPALAGLLLRP RHAALVHDPRSLRGRATRLLEVLGRPFQRAPQAYGNTVRKVVGRRGVALLAYGGLLALTWFGFNAVPAGFVPMQDKYYLVGIAQLPNAASLERTDAVVRQ MSKIALDEPGVESVVAFPGLSVNGFVNVPNAAVMFVMLDPFKERTSPDMAAVAIAGRLQAKFASIPDGFLGVFPPPPVPGLGVTGGFKLQVEDRGGVGLE ALVQQTQVLMTKATESGQVAGLMTSLDVNAPQLNVDIDRTQVKSQGVRLADVFESLQVYLGSLYVNDFNRFGRTYKVTAQADADHRMQAEAIGRLQVRNA AGDMLPLSAFVTVTPSSGPDRVIHYNGYPSADISGGAMPGVSSGQAVALMERLAQEVLPEGVTYEWTDLTYQQKLAGSSALFIFPLCVLLAYLILAAQYN SWLLPLAVLLIVPMCLLSAILGVWLVEGDNNVFVQIGLVVLVGLAAKNAILIVEFARSLEAEGASPLEAVIHACQLRLRPILMTSLAFIAGVVPLVFASG AGAEMRHAMGVAVFAGMLGVTLFGLFLTPVFYVVMRSLALRVQRQGASPKVQLKESAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site