Pseudomonas syringae pv. syringae B728a, Psyr_0187
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCGGGCCAGGCCCCGCGGGTTCCATCTGGTGACTGACGAGATAGTCGCGGGGTTGCCCCCGTTGCGCGGTTGTCGTGTCGGGCTACTGCATGTATGGC TGCAACATACCTCGGCTTCGTTGACCGTCAACGAAAATGCCGACCCGGCGGTACGTCGCGACTTTGAGCGTTTTTTCAACCGTCTGGTGCCCCAGGGCGT GGACGGCTACGAACATGACGACGAAGGCCCTGATGACTTGCCAGCGCATTTCAAGGCCAGTCTGCTGGGCTGCCAGTTGCTGTTGCCGGTTACGGCAGGG CGACTGGCGCTGGGCACCTGGCAAGGTATTTACCTGGGCGAACATCGAGACGCTGGTGGGTCTCGTAACGTCCTGGCCACCCTTCAGGGTGAGTGGACAT AACCGCTGAGGTCAGCGGTTGTTGAATTTTTCCGGTTGCCTTAGCAATTCTGGGCGGTTGGGCTATAACTAATCAGCTTTCGCAAGTCATGAGGTACAAC
|
|
| DNA Sequence for Gene |
>Psyr_0187
ATGAGCGACGACGACGATATTAAGGACGATCTGGAAGACGACCTGGAAGGCGAAGAGGACGGTGAGGAGCTTGCAGCTGCTCCCGGCGACGACCCGGTCG AAGTAGACGATGACGTTCCGGCACCTGCCGCAAAAGGCAAGGCCAAGGCTGCAGTCTCGGTCGATGAACTGCCCAGCGTGGAAGCCAAGAACAAGGAGCG CGATGCGCTGGCACGTGCCATGGAAGAATTCCTGGCGCGTGGCGGCAAGGTGCAGGAAGTGGAGGCCAACGTGGTCGCCGATCCGCCCAAGAAGCCTGAC AACAAATACGGTAGCCGCCCTATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCTGCATGACTGTATGAGAAAAGCCCGCCGTCGCTGCGGGCTTTTCTATGCGCGCCTGTCAGTGCGCCTTCAGGCCCAGCGCGCCAGCACCTCGGGCAG TTGCGACAGGTTGTGGATCTCGGCATCGGGCAGTCGATCCGCATCCCAGGCCTTGCCTTGCGGGTTGTACCAGATGGCGCGCATGCCGGCCTGCTGGGCA CCTGCGATATCGTCCTTGGGATGGTCACCGACATGCACCGCCGCGCCGGCATCGACCTTTGCGCGGCGCAACGCCTCCACGAACGGTGCCGGATCAGGCT TGCCGATGCCCAGGTCCTCGGCGCACAGCGCGAAGGCAAAGTAGTCCGCCAGCCCCAGACGACGCACATCGGCATTGCCATTGGTAATCACGCCGAGCGT GAAGGTCTTGGCGAGAATTTCCAGCATCGGTTGCACCTCAGGGAAAATCTGCACCTGATGACGGCCCTGCAGGAACACTTCAAAGCCCCGGTCGGCCAGG
|
|
| Amino Acid Sequence |
>hypothetical protein
MSDDDDIKDDLEDDLEGEEDGEELAAAPGDDPVEVDDDVPAPAAKGKAKAAVSVDELPSVEAKNKERDALARAMEEFLARGGKVQEVEANVVADPPKKPD NKYGSRPI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|