Pseudomonas sp. WCS374, PD374_RS14045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTGCGCCGTCAGGCACAGAAATGAGGCGGCGAACCCGGCCGCCAGGATTTTGAGGTAACGCACGTTCGTCTCCAGATGCCGTGTGGGGCATGCAAGTC GATCCGCACGCACGGTCTCGGTTTAAAAGGTTATTGTTTATAGCTATGGGGTGTGAGGGCTATTTTTGCGGGCTGAAGGTAAGATGTAAAATACTGATTA CGCATAACCTAATTCAATAAAAATGCGTATATCGCATCACGCTAGCGCGCAAATTCAATCCGGGCCATCAAGCCCGAACCACGCCGAAGGCGAAAGAACG GGTCGAATACACGCTCCAGGTCCGCTTCGGGAATCCCCGGCCCCTCGTCGCTGACCTCAGGCCGGCCCGGCATACAGCCCCGGCGCTCGTTAGCACGCCT GCTCAAACGTCATAATCACAGGGGCATCTGCGTGGTAATCTCCCGGCACCACGAATAGACATTGATCGTCACTTGACGATGACCAAAGCCAGGAAAGACC
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| DNA Sequence for Gene |
>PD374_RS14045
ATGCCCAAGATTTCTCACTCAGCGCTACGCCGTAACTTCCGTGACCTGCTGGCAACGCCCCTGTGCGTTGAAACCGCCTCCGTATTCGACCCCATGTCTG CCCGCATCGCGGCCGACCTGGGGTTTGAAGTGGGAATCCTGGGCGGTTCAGTCGCCTCCCTGCAGGTGCTGGCGGCCCCCGATTTTGCGTTGATTACCCT GAGTGAGTTCGTCGAGCAAGCCACCCGCATCGGTCGTGTGGCCCAACTGCCATTCATCGCCGACGCCGACCACGGCTACGGCAACGCCTTGAACGTAATG CGCACCGTCGAAGAACTGGAACGCGCCGGCGTCGCGGCGCTGACCATCGAAGACACCCTCTTGCCCGCGCAATTCGGGCGTAAATCCACGGACCTGATTT CCGTCGAAGAAGGCATCGGCAAGGTCAAGGCCGCGCTGGAGGCACGTGTCGACCCGGCGCTGTCGATCATTGCGCGCACCAATGCCGGCGTGCTGCCCAC CAGCGACGTGATTGCGCGGACCAAGGCCTACGAAAAGGCCGGTGCTGACGGCATCTGCATGGTCGGCGTCAAGGACTTCGACCACCTGGAGCAAATCGCG GAGAACCTCAGCGTTCCGCTGATGCTGGTGACCTACGGCAACCCGCAACTGCACGACAGCGAGCGCCTGGCCAGCCTGGGCGTGCGCATCGTGGTGGCCG GGCATGGCGCCTACTTCGCCGCGATCAAGGCCACTTACGACAGCCTGCGTGCCCAGCGCCAGCTGACCCACAGCACCTCGAACCTCAGTGCGACGGAGTT GACCCACACTTACACCTTGCCTGAGAGCTATGTGGCGTGGGCCGAAGAGTTCATGGATGTAAAAGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAATCACTCACGGCTCAGCCGTTGGCGCATCCCTGCGCTGGCGGCCGGGCCGGGCTGTACCACGCACTGATCCATCGCCACCCACGCACCTTCCTCCGT CGCCATCATCGGCTGCACCGGCCGGCCCGTCTCGCGTTCCACCACCTCGACACTGATGCCCTCCTCGGCGTAATGCCGATTGCCCCACGCCACCAACGCC ATCAGCACCATACGAAAGTCTTCGCCTCTGGCCGTCGGCACGTATTCGTAGCGTGGCGGCCGCTCGCTGTAGGCGCGGCGCTCCAGCATCCCCGCTTCTA CCAAGCCATTAAGGCGGCGCGTCAGCATGTTGGGCGCGATGCCCAGGCTGCGCGAGAACTCGTCAAAACGGCGCAAGCCGTGCAAGGCGTCGCGCATGAT CAGCATGCTCCACCACTCCCCTACCCGTTCAAGGCTACGGGCGATGGGGCATTCGGCACTGATGAGGGATTTGCGCTGCATAAGTATTCCTGTGTGCGAG
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| Amino Acid Sequence |
>oxaloacetate decarboxylase
MPKISHSALRRNFRDLLATPLCVETASVFDPMSARIAADLGFEVGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAQLPFIADADHGYGNALNVM RTVEELERAGVAALTIEDTLLPAQFGRKSTDLISVEEGIGKVKAALEARVDPALSIIARTNAGVLPTSDVIARTKAYEKAGADGICMVGVKDFDHLEQIA ENLSVPLMLVTYGNPQLHDSERLASLGVRIVVAGHGAYFAAIKATYDSLRAQRQLTHSTSNLSATELTHTYTLPESYVAWAEEFMDVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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