Pseudomonas syringae pv. syringae B728a, Psyr_0138
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGACCAACGCGATCAAGGTCAACCTGCCCAAGACCGACGCGGTCGCTCCCGCCGAGAAGAAAAACCCGGTGGTGGTCAGCGTCGATCAGGACGGCAAGTT CTACCTCGCCAAATCGGAAATCGCCCCGGAGCTGCTGGAAAAAAGCCTGCAGGACGAAAAGGCCAAGGACCCGGAAATCCGCGTCCAGTTGCAGGCCGAC ACCGCCGTGAATTATGGCCAGGTGGCCAAGGCCATGGCCTCCATCGAACGCTCCGGCATTACGAAGATATCCGTCATGACAGCGAAATGACGCTCGACTG ACCGGGTGGCTTCGCCTCGCGAAGCCGTCTGACCCGACCCCCGTGAATGCGGTTGTCCGTGGGCTGAAAAGCCCCTGGAGGGGAGCGGCTTGCTGGAAAA AGAAGAAGTGGAACTCCCGCTCGGCACAACCGCGTCGGGAACAGAGGGCTCACAAGGCCATTTCAATAATGTCTGGATCAAGTCGGAACTAACCATGCTG
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| DNA Sequence for Gene |
>Psyr_0138
ATGAATCTTCCCGGTTGCACCCTCAAACCACTGGCCCTCGCGGTCCGGCGTCATCCACGTGCCCTGCTCTGCGCATTGGCCATGGGCATGAGCGGTGCCC AGGCGGCAGACGCCGTCGATGCGGATACCAGCGGCTCGGCCGTGTCCACCAGCGCAGCGGTTGTGCCTGCCACGACCCAGCTGCAACGTGTAGAAGTGAC CGGTTCGGCGATCCGCCGGGTCGATGCCGAAACCGCCGTGCCGATTACCATCCTGCGCGCCGATGACCTGAAGAAACAGGGCGTGACCACCACCCAGGAA ATGGTCCAGCGCATCACCGGCAGCCAGTCGATCAACAACAGCGCAGGCTCGGTCGGAGCCGGAACAGGAGGCGCCTCCTTCGCCGACATGCGCGGCATCG GTGCGAACAAGACGCTGGTGCTGCTCAACGGCCGACGTCTGGCCAACAATGCGTTGTCCGGTGTGGGTACGCCCAACGGCAGCGCCATTGACCTGAACAT GATCCCGTTCGCTGCCATCGACCGCGTGGAAGTGCTGCGTGACGGTGCCTCGGCGCTGTACGGCACCGACGCCATCGGCGGCGTGATTAACTTCATCACC AAGAAATCCCTGACTGACGGCAGCCTGACCCTCGGCGGCGAGACGCCGACCGCCAGTGGCGGCGGTGCGACCAATGACATGAGTGCCAGTTGGGGCTTCG GTGATCTGGAAGAAGACCGCTTTAACGTGATGGGCGTCTTCAACTACAACAAGCAGCAGAATCTGGACGCCAATGATCGTTCGTTTGCCAAGGATTACGT ACCGGGACGCGGTCTCAACCAGACCTCCGGGACGGCATATCCCGGCAATTATTTTCAGGGCGACAATTCGGCAAACCCGCTGGGCAGAAACTGCAGCGGT CCTAACCTGATCGCCAGCAACGGCATCTGCCGGTTCAGCACTCGCGAATACATCGACCTGATCCCGCAAACCGAAAAGACCTCTTTTTTCGGCAAGGCCA CCGGCAAGCTGGCCGACGATCACAACGTCAGCCTCGAATACTTCTGGGCCCGCAACAACAACCATACCGATATCGGGCCAGCGCCTCTCACCGGGCTGTC ACTGGACTCGTCGTCACCCTTCTATCCCGGTAACGGTATCACTCCGGCCCCCACCGATTTCACCCTCGACCCGACGCAACCGGTCAGCACCGCCTGGCGA GAAACGGCAGCAGGCCCACGCGGATCAAGCGACCAAAATACCAGTCAGCGCTTTCTGCTGAATTTCGACGGTCTGGTGGGTGGCTGGGACTACAACGTTG GCGCGTCTTACAACCAGAACAAAGTGTTGTCATCACTCACCGATGGTTATATCAGCGATGCTGCAATGCTTAATGGTCTCGCCAACGGCACTCTCAATCC GTTTGGTCCGCAGACCGCTGCCGGTCAGGCGCTGATTGACGCCAATCAATACCATGGCCAGTACTCAAGCGCTGTGGGCCGGGTGGCCGGGCTGGATGCG CGCATCAGCCGGGAAATCGGTGACTGGTTCGGTGCAGGCCCTGCCGGCATTGCGCTAGGTGGCGAATACCGAAAAGAGAAAATGCATCAGGAGTACGAAG CGTTCGTCAACGACGTCAGCAGTCTGGGCGCAGATGCCGCAGGCAGCGTCGAAGGCGACAGGAGCGTCAAGGCGGAATACGCCGAACTGAATGTCCCCGT GCTGGACAGCCTTGAACTGACCGCCGCCGTTCGTCACGACAAATACAGCGACTTCGGCAGCACCACCAACCCGAAATACTCGTTCCGCTACCAGCCGTTC AAGCAACTGGTGGTCCGTGGTGCCTACAGCGAAGGCTTTCGAGCACCTTCGCTGTACGAACTGTACGCCCCGCGTAGCACGACCTTTACCCAAGGCTATT ACAACGACCCGGTGCTGTGTGCCGGTGGTGTCGTCCAGCCTGGTGGTAACGCCGGTCGTGATTGCCAGCAGCAGTTCCTCAACAATGGCGGAGGCAACAC CGAGCTGGCCCCGGAAAAAGCCCGCAACATGACCCTGGGCTTCGTCTATCAGCCGGTCAACAACCTGTCGATGGGCCTGGATTTCTGGTGGATTCACATT TCCAACCAGATCCAGGCGTTCCCCGAGTCGACCGTGTTCGATGACCCGAATACCTACGCCGACCGCTACGTGCGCGCCGCCGACGGTTCGATCGCCAACA TCGTGACCGGCAACGCCAACCTGGGCATCGTCAAGACCAGCGGTGTCGACGTAACCCTCGACTATCGCTTTCCGAACACGCCTTACGGCCAGTTCGGTCT GGGCATGACCGGCACCTACGTCACCCGCTACGACTTCCAGAACATCATCGACGGCCCATACACCGACAAGGTCGGCGACTTCCAGGGCGACGGGGTGATT TCGCGCTGGAAACACGTGCTGACCGGTACCTGGGCACTGGGCGATACCCGCGCCTCCATCACCAACCGCTTCACCAGCGGCTACAACGACTACGACCGCA CCACCAATGCGCGGGTCGCGTCGTATGCGCTGTGGGACATGTCGGTGGGTCATACCTTTGACAAGGTGCTGGATATCGATGCCGGAGTGCGCAATATGTT CGACCGCAACCCGCCGTTCTCCAACCAGGCCTACAACTTCCAGTCCGGCTACGACCCTCGTTACGCCGACCCGCTGGGCCGCACCCTGTTCGCCCGCGCG ACTTACCACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGTGACGACGTGGCCCATACACGCTCCGTGGGCCACGTCAGATTGCGAGCTCGCCCCCTCCGGCCCAGGTTTCATCCGCCTTCCCCGGCCGGGGGCTTT TTCGCAGCGTTCCGTCATTCAGTGCGTACGAGGAAAGCCCCACCATGTCGCGTCTTAACCGTTTTCTGCGGCGCCTGCTTCTGGGTGTTGCGCTGTGCAG TGGCTGGCAGACAGTGCTGGCGACGCCGACCCACGCCTTGACCGTCTATGGCGAGGCAGCGAAATACCCGGCCGGCTTCCAGCACTTCGATTACGTCAAC CCGAACGCCCCCAAGGGTGGTTCGCTGACCCGGTCGGCGGAAGAAATCGGCCAGTTCAATTACCTCAATCCCTACGTCGATCAGGGCATCAATGTGCGCG AGGTCGACAGCTGGGTGTACTCGCCACTGGCCTATCGCTCGCTGGATGAGCCGTACACGGTGTATGGCCTGATCGCGGAAAAGATGGAGATGGACCCCGA
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| Amino Acid Sequence |
>TonB-dependent receptor:TonB-dependent receptor
MNLPGCTLKPLALAVRRHPRALLCALAMGMSGAQAADAVDADTSGSAVSTSAAVVPATTQLQRVEVTGSAIRRVDAETAVPITILRADDLKKQGVTTTQE MVQRITGSQSINNSAGSVGAGTGGASFADMRGIGANKTLVLLNGRRLANNALSGVGTPNGSAIDLNMIPFAAIDRVEVLRDGASALYGTDAIGGVINFIT KKSLTDGSLTLGGETPTASGGGATNDMSASWGFGDLEEDRFNVMGVFNYNKQQNLDANDRSFAKDYVPGRGLNQTSGTAYPGNYFQGDNSANPLGRNCSG PNLIASNGICRFSTREYIDLIPQTEKTSFFGKATGKLADDHNVSLEYFWARNNNHTDIGPAPLTGLSLDSSSPFYPGNGITPAPTDFTLDPTQPVSTAWR ETAAGPRGSSDQNTSQRFLLNFDGLVGGWDYNVGASYNQNKVLSSLTDGYISDAAMLNGLANGTLNPFGPQTAAGQALIDANQYHGQYSSAVGRVAGLDA RISREIGDWFGAGPAGIALGGEYRKEKMHQEYEAFVNDVSSLGADAAGSVEGDRSVKAEYAELNVPVLDSLELTAAVRHDKYSDFGSTTNPKYSFRYQPF KQLVVRGAYSEGFRAPSLYELYAPRSTTFTQGYYNDPVLCAGGVVQPGGNAGRDCQQQFLNNGGGNTELAPEKARNMTLGFVYQPVNNLSMGLDFWWIHI SNQIQAFPESTVFDDPNTYADRYVRAADGSIANIVTGNANLGIVKTSGVDVTLDYRFPNTPYGQFGLGMTGTYVTRYDFQNIIDGPYTDKVGDFQGDGVI SRWKHVLTGTWALGDTRASITNRFTSGYNDYDRTTNARVASYALWDMSVGHTFDKVLDIDAGVRNMFDRNPPFSNQAYNFQSGYDPRYADPLGRTLFARA TYHF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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