Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
TGGCTACGCGCCGAGTCGGATATTCCGATTTTGATGCTCACCGCCCGCTGCGAACCTACCGACCGCATCATCGGCCTGGAACTGGGCGCCGATGACTATA TGTCCAAGCCGTTCGAGCCGCGGGAGTTGGTCGCGCGTATCCAGACCATCCTGCGCCGGGTGCGTGATGACCGCACCGAACAGCGGGCCAATATCCGTTT CGACACTTGGCGCCTGAACAGCGTGCTGCGCCAGCTGGTGGCCGATGATGGCCTGGTGGTGCCGTTGTCCAACGCCGAGTTTCGTTTGTTGTGGGTGTTT ATCGAACGCCCTCGCCGTGTGCTGAGCCGCGAACAGCTGCTGGACGCGGCCCGTGGGCGTTCCATCGAGGCCTTTGATCGCAGCATCGACCTGCTGGTGT CGCGCCTGCGCCAGAAGCTGGGGGATGACCCCAAGGCTCCGCAATTGATCAAGACGGTACGCGGCGAAGGCTACCTGTTCGACGCCCGGGATATCGGTTG
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DNA Sequence for Gene |
>PD374_RS17465
ATGCGCGCGCCCTTCAACACGCTGTTCGGGCGACTGTTCGGCCTGTTGCTGGTGGCGATTGTGCTGGCCCATGTGCTGGCGTTCTTCTGGTTCCACCACT ACGGCCCGCCGCCACCACCCCGCGCGGCCTTCGTCGAACAACCAGATGGCAGCCTCACGCCCTTGCGCAAAGCGCCTCGCCCCTGGTTCGGCGGCCCGGT GGTGCCCCTGACATTTCAATTTATCTCGCTGATCATCGCTGCCTGGTACGGCGCCAAACTGCTGAGCCGGCCAATCCAGCGCCTGAGCGCAGCGGCCGAG CGCCTGAGCGTCGACCTCGACAGCCCGCCCCTGGTGGAAACCGGCCCTCGCGAAGCACGCCAAGCGGCCTCGACCTTCAACCTGATGCAAAAGCGCATCC GCGAACAAGTCAGCCAGCGCGCACGCATGCTCGGCGCGGTCTCCCACGACCTGCGCACCCCGCTCTCGCGCCTCAAGTTGCGCCTGGAACAAATCGAAGA CCCCAAGCTGCAAGGCCAGATGCGCCAGGACCTGGACGACATGATCGGCATGCTCGATGCCACCTTGAGCTACCTGCACGAACAGCGCACCAGCGAGACA CGGCATTGGCTCGATGTACAGGCGTTGGTGGAATCCCTGAGTGAAAACGCCCAGGACCAAGGCCGCGACGTGCAGTTTGCCGGCACCTGTACACCGTTGC AGGTACAGCCGATGGCCCTGCGTTCATGCCTGAACAATTTGATCGATAACGCCCTGCGCTATGCCGGCACCGCCCGGGTGGAACTGGCCGACAGCCGCGG TGCGTTGGTAATCCGGGTGATCGACCACGGCCCGGGAATCGCCGCCGATAAGCGCGAAGCGGTGTTCGAGCCTTTCTTTCGCCTGGAAGGGTCGCGCAAC CGCAATTCCGGAGGGGTCGGTTTGGGGATGACCATTGCCAGGGAGGCCGTCGAGCGACTCGGCGGCCACCTGAGCCTGGAAGATACACCGGGCGGTGGGT TGACGGCGGTGATGTGGTTGCCGAGGGTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCACTCCCATTTACCTGACGCGCCGCGATCCAAATGTGGGAGCTGGCTTGCCTGCGATTGCGCAGTGTCAGTCGATGAAGTGTTGGCTGGCCCACCGCTA TCGCAGGCAAGCCAGCTCCCACAAGTACCGCGGCGCACCACAGTTAGGTACACCCATCAGTTACACGGTTTGTCTTCACGACGCACTTGCGCCTGGCTCG CGCTCCAGTCTGTCAACAGGCTGTAGGCCACCGCCAGCAACGTCGGGCCAATAAACAGGCCGATAAAGCCGAACGCTATCAACCCGCCAAATACACCCAA CAACACAATCACCAACGGCAGGTTGCCGCCACGGCTGATCAGGTACGGCTTGAGCACGTTATCCACGCCGCTGATCACGAACGTGCCCCACACGCCCAGG AATACCGCGTAGGTGTAGTCGCCCTTCCACGCCAGCCACGCCGTGGCCGGGATCCACACCAGCGGCGGCCCCATGGGAATAAGGCTGAGCAGGAAAGTCA
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Amino Acid Sequence |
>sensor histidine kinase
MRAPFNTLFGRLFGLLLVAIVLAHVLAFFWFHHYGPPPPPRAAFVEQPDGSLTPLRKAPRPWFGGPVVPLTFQFISLIIAAWYGAKLLSRPIQRLSAAAE RLSVDLDSPPLVETGPREARQAASTFNLMQKRIREQVSQRARMLGAVSHDLRTPLSRLKLRLEQIEDPKLQGQMRQDLDDMIGMLDATLSYLHEQRTSET RHWLDVQALVESLSENAQDQGRDVQFAGTCTPLQVQPMALRSCLNNLIDNALRYAGTARVELADSRGALVIRVIDHGPGIAADKREAVFEPFFRLEGSRN RNSGGVGLGMTIAREAVERLGGHLSLEDTPGGGLTAVMWLPRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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