Pseudomonas sp. WCS374, PD374_RS19390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCGAGATAATTCATGCCGCGCAGTCTACCACTGCCACCAATATATCGTTATAACCCGATATACCGATTCGACCTGGCCTCAGATCAAAATTATATTGG TATATCGGGATATTACGATCTAAAGTTCGCCTTATCGCGATATAACGCTTTACGACACCGAGCACCCTGCCATGTCCATCGACCTCGACGAAATAATAAA AGCCCTGGCGCACCCAGTACGACGAGACATCCTCACCTGGCTCAAAGACCCGAAAGTGCAGTTCCCCGAGCAATTGCACAACCACGAATACGGCATCTGC GCCGGGCAGATCGACCAGCGCTGCGGCTTGTCCCAGTCGACGGTGTCGGCCCACCTGGCCACCTTGCAACGTGCGGGTCTGATCAGCAGCCAGAAGGCTG GACAGTGGCACTTTTTCAAGCGCAATGAGGAAGTGATCCAAGCCTTTCTCACTGCGCTCATTACCGAACTCAGCGCACCGTAATCACCAAGGACACGTAC
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| DNA Sequence for Gene |
>PD374_RS19390
ATGCCCCTCTCGCTACTCATACTGGCCCTGAGCGCCTTCGCCATCGGCACCACCGAGTTCGTCATCATGGGCTTGCTGCCCGATGTGGCGGCAGACCTGG GTGTGTCAATTCCCGGCGCCGGCTGGCTGGTCACCGGTTACGCCTTGGGCGTGGCCATCGGCGCACCGTTCATGGCACTGGCCACCGCCAGGCTGCCACG CAAGGCGGCGCTGGTAGCGTTGATGGGTATTTTCATTATCGGCAACCTGCTCTGCGCCCTGGCAAGCGACTACAACGTGCTGATGTTTGCCCGTGTGGTC ACGGCGTTGTGCCACGGAGCCTTCTTCGGAATTGGTTCGGTGGTGGCGGCCAACCTGGTGCCGGCCAACAAACGTGCGTCGGCGGTGGCGCTGATGTTCA CCGGGTTGACCCTGGCCAACGTGCTGGGCGTGCCCCTGGGTACGGCGCTGGGCCAGGAAGCCGGCTGGCGCTCGACCTTCTGGGCCGTGACCGTGATTGG CGTGATCGCCTTGATCGGCCTTATTCGCTTCCTGCCCGCCAAGCGTGACGAAGAAAAACTCGACATGCGTGCCGAACTGGCCGCCCTCAAGGGCGCCGGT ATCTGGTTGTCACTGAGCATGACTGCGCTGTTTGCCGCGTCCATGTTTACCCTCTTTACCTACGTCGCGCCGCTGCTGGGCGATGTCACTGGCGTGTCGC CCAAAGGCGTGACCTGGACGCTGCTGCTGATCGGCCTGGGCCTCACCGTGGGCAACATCATCGGCGGCAAACTGGCGGACAAGCGCCTGGCGGCCACCTT GATCGGCGTGTTCATCAGCATGGCGGTGGTTTGCACGGTGCTGAGCTGGACCAGCGTTGCGGTGATACCGACTGAAATCACCCTGTTCCTGTGGGCCACC GCTTCGTTCGCCGCCGTGCCGGCGCTGCAAATCAACGTGGTGACCTTCGGCAAGGCCGCGCCGAACCTGGTGTCCACCCTGAACATCGGGGCCTTCAACA TTGGCAACGCCCTCGGCGCCTGGGTCGGTGGCAGCGTGATTGCCCACGGTTTCGGCCTGACCCGCGTGCCACTGGCCGCCGCGGCGCTGGCCATCCTCGC GCTGCTGGTGACCCTGATCACTTTCCGTCAGGGCGCCAATGCCGACCTGGCCCCCGCGACCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAACTTGAAAGAGAAGGTGTTTTTCCCATGACGACTATTTTCGATCCGATCACACTGGGCGACCTGCAACTGTCGAACCGCATCATCATGGCGCCGCTG ACCCGCTGCCGCGCGGATGCCGGCCGCGTGCCCAATGCGCTGATGGCCGAGTACTACGTGCAACGCGCCTCCGCCGGGCTGATCCTCAGCGAAGCCACTT CCGTGACACCGATGGGCGTGGGCTACCCGGACACCCCCGGCATCTGGTCCAACGACCAGGTGCGCGGCTGGGCCAACATCACCAAGGCCGTGCATGGCGC GGGCGGCAAGATCTTCCTGCAGTTGTGGCATGTGGGCCGCATCTCCCACGCGTCCTACCTGAACGGCGAAACCCCGGTGGCTCCGAGTGCGGTTCAGGCT AAAGGCCACGTCAGCCTGGTTCGCCCATTGGCCGACTACCCGACCCCGCGCGCCCTGGAAACCGCTGAAATCGCCGACATCGTCGACGCTTACCGCACCG
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| Amino Acid Sequence |
>major facilitator family transporter
MPLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATARLPRKAALVALMGIFIIGNLLCALASDYNVLMFARVV TALCHGAFFGIGSVVAANLVPANKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVIALIGLIRFLPAKRDEEKLDMRAELAALKGAG IWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLLIGLGLTVGNIIGGKLADKRLAATLIGVFISMAVVCTVLSWTSVAVIPTEITLFLWAT ASFAAVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAAAALAILALLVTLITFRQGANADLAPATH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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