Pseudomonas sp. WCS374, PD374_RS19535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCAGTCCGTGTCTGAATTGCGGTGCCTGCTGTTCACACTTTCGCGTGTCCTTCTTTTGGGGTGAGTGCGCCTCGTCCGGGGGCACGGTGCCCGATGAC CTGGTGGTGCAGATCAACCCCAGCCGCGTGGCGATGATCGGCACCGACCGCAAACCGGCACGGTGTTGCAGCCTTGAAGGTGAAGTCGGACAGGCCACCA GCTGCTCAATTTATGAGCAGCGCTCCAGCGTGTGTCGCGAGTTCGAGGCGTCCTGGAGCCAGGGCGTGCAAAATGTCGATTGCGACGCCGCCCGTGCCGC ATTCGGCCTGGCCCCGTTGGAGGCCCCGCACTTCGAACTCGACCTGCCCATCAGCGCTTAGCACCAAACGCTATGGACGGCATATCAAAATAATTTGAGA TCAAAACGCCATTACTCATGGCAAATCTCGAGAGACTTCTATACTCGACCTCATAGGTCATCGCCGCTGGCAGTGACATGGCTCTGTGACGGGATAAGCT
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| DNA Sequence for Gene |
>PD374_RS19535
ATGGAATGGCTGGGGCAGCATTTTTTTACCGACCTTCCAGACAGCGGGCATTTATTGCTCAACTGCAGTCATAACCCGTTTCTGGTGCTGCTGGCGTACC TGGTCGCCTGCGCGGCGGGTTTCGGTACCCTGGACATGGCCGAACGTGTGGGCCATGTCGAAGACCCCACCGCCCGCCGCCATTGGCGCTGGCTGGGTGC CGGTTGCCTGGCAGGCGGCATCTGGTCGACCCACTTCATCAGCATGCTGGCCTTCCAGGCCCCCATCGCCATTCACTACGAACTGATCATGACGTTCGCC TCGCTGCTGATCGCCCTGATCGCCTCGTTGCTTGCCATGCAGACCCTCAGTCATACCCACCTGCGCTTTCATCAGTACCTGGTGGCTTCGGTGTGGATGG GGCTGGGTATCGCGTTGATGCACTACGTGGGCATGTCAGCCATGCGCTCCCAGGCCCAGGTGTACTTCGAAACACGGCTGTTTTTGGCCTCGGTGGCGAT TGCCATGGGCGCCAGCCTGGCCGCATTGTTGCTGTCCAGTTACCTGCGCAACGGTGCCGGCGTGTTTCACCAACTGCTCAAATACGCCGCCAGCCTGGTG CTGGGCGCCGGGATTCTGAGCATGCACTTCACCGGCATGGCGGCTATGCAAATGCTGGTGCCCAGTGGCGCGGATCTTTCGTTACCGGCGGATAACAACC CGATTCAACTGGGCCTGTCGGTCGCCATGATCACCTTGCTGGTAATCGGCAGCAGCATCAGCGCAGCCCTGGCCGACAAGAAGTTGCAACACAAGGAGCG TGACCTGCGTCGGGTCAACGCGCTGCTCAGCGAACTCGACCAGGCCCGCGCTTCGCTGCAACAAGTGGCCCACTTCGACGCATTGACCAGCCTGCTTAAC CGCCGTGGTTTCAATCAGATCTTTGCGGAAAAAGTCGCGGAAAAAACCCGCAGCCAAGGCATGCTGGCGGTGATCTTCCTTGATATCGACCATTTCAAGC GTATCAACGACAGCCTGGGCCATGACGCGGGCGACCAGTTGCTCACAGTGCTCGCCGGGCATATCAAGGGCTCGATACGCAGCCATGAAGATGTAGTGGC ACGCTTTGGCGGCGATGAGTTCTGCATCCTGGTCAATATTCATCACCGCGACGAAGCCCGGCACATGGCCCAGCGCATCATGCAGAAGATGAAAGAGCCC ATCGAACTGGCCGGCCGACGCATGGTGATGACCACCAGTATCGGTATCAGCCTGTTCCCCGAGGACGGCCACACCTGCGAAGAGCTGCTGAAAACCGCCG ACCTGGCGCTGTACCAATCCAAGGATGCGGGGCGCAATTGTTTGAACTTCTTCAGTTCCAACCTTAAAACCCGTGCCTTTCTTGAGCTGCAACTGGAAGA AGAACTGCGCGCCGCCTTGCGTACGCGCAGCCAGCTGGTGCTGTTTTATCAACCGATCTTTGACATGAAACTGGGCAAGGTCACACGCCTGGAAGCCCTG GTGCGCTGGCAGCACCCCCAACACGGGCTACTGGCCCCGGACCGCTTTATCGGCATCGCCGAGAACAACGGACTGATCGCCGAGCTGGACCACTGGGTAT TGCGTCAGGCCTGTCACGACCTGAGCCTGTTGTCTGACCGGGGCTACACCGAGCTGATCATGGCCGTGAATTGCTCGGCGCGGAACCTGGCGCGTGACGA ACTGGCCGATGAAATCGAAGACGCCCTGCGCTTCGCCGGCATAGGCACCAACCGCCTGGAACTGGAAGTCACTGAAAACGCGTTGATGGGCAACATCAGC AGTACCTTGGCGCTGTTGCGGCAGATCCGCGCCCTGGGTGTGTCGCTGGCCATTGATGACTTCGGCACCGGCTATTCGTCGCTGGCTTACCTCAAGCGCT TGCCGCTCAACACTTTGAAGATCGACCGCTCGTTTATCCAGGACATCCCCAAGTCCACCGCAGACAGTGAAATTGTCCAGGCGATTATTGGCATGGCCCA CACCCTGCACTTGCAGGTGGTCACCGAGGGCGTGGAAACCCAGGCGCAGTTCGAGCTGCTGCTCAAGCATGGCTGCGACTACATCCAGGGCTACCTGCTC AGCCCGGCGGTGCCTTTCGATGACATCATCGGCGTGATGCAGGGCATTGCCATGCGCAATCCGTTATATCTGCCAAGCGTGGAAGGCAACGACGCTGCGC AGCCAAAAGACCCGGCGCCAGGGCGTATCGGCTCGCCTTCTATTGTCAGGCCGATTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCCGGGCACGGGGAGTGGTGGTGTGATCGTTGCTTCTCTTCACGCCGCGTCATACCCGGAAACAATTGCCCCACTCATTCCTTCTGCCCTCAACTGTT CCCGTGACGCTTACGTCACCCTCGGCTGTGACCTTTCTCTACGGCAAGGTGCCATCACGCGTTGAGCGGTTACTCGGCTACACACTTCACTCCGTGAAAA ATACGCACCTTTTTCGTGCGCGCCATTATTACCGCGCCCTTTCCTGGATCAGGATCCACGGCGAGACCACTACAGCCCATAAGCTTGGATCCCGTTCCAC CAGGTCTAATGCCCGCGTCGCAGACACCTCGCCAAGGGTGCCTGCAGCCAGCCAGGCGGCGACTTTGTCACGGTTGTCTTCGGCCATTCCTTCGGCGGCC TCGATCAAATCCAGGCCGGCATCGACCCACAATAGGGCACCCTTGGCAAAGAACGGTTCAAGCTCCTTCCAGGAAATTTCGGCGGTTTCACCGAGCAGCT
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MEWLGQHFFTDLPDSGHLLLNCSHNPFLVLLAYLVACAAGFGTLDMAERVGHVEDPTARRHWRWLGAGCLAGGIWSTHFISMLAFQAPIAIHYELIMTFA SLLIALIASLLAMQTLSHTHLRFHQYLVASVWMGLGIALMHYVGMSAMRSQAQVYFETRLFLASVAIAMGASLAALLLSSYLRNGAGVFHQLLKYAASLV LGAGILSMHFTGMAAMQMLVPSGADLSLPADNNPIQLGLSVAMITLLVIGSSISAALADKKLQHKERDLRRVNALLSELDQARASLQQVAHFDALTSLLN RRGFNQIFAEKVAEKTRSQGMLAVIFLDIDHFKRINDSLGHDAGDQLLTVLAGHIKGSIRSHEDVVARFGGDEFCILVNIHHRDEARHMAQRIMQKMKEP IELAGRRMVMTTSIGISLFPEDGHTCEELLKTADLALYQSKDAGRNCLNFFSSNLKTRAFLELQLEEELRAALRTRSQLVLFYQPIFDMKLGKVTRLEAL VRWQHPQHGLLAPDRFIGIAENNGLIAELDHWVLRQACHDLSLLSDRGYTELIMAVNCSARNLARDELADEIEDALRFAGIGTNRLELEVTENALMGNIS STLALLRQIRALGVSLAIDDFGTGYSSLAYLKRLPLNTLKIDRSFIQDIPKSTADSEIVQAIIGMAHTLHLQVVTEGVETQAQFELLLKHGCDYIQGYLL SPAVPFDDIIGVMQGIAMRNPLYLPSVEGNDAAQPKDPAPGRIGSPSIVRPIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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