Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
ATACCGTGATCGGTAACGGTGTGAAGCTCGACAACCAGATCCAGATCGCTCACAACGTACAGATTGGCGATCACACCGCCATGGCCGCCTGCGTGGGTAT TTCCGGCAGCACCAAGATCGGCAAGCATTGCATGCTCGCCGGTGGCGTAGGGCTGGTGGGGCATATCGACATTTGCGACAACGTCTTCATCACCGGCATG ACCATGGTGACCCACTCGATCACAGAGCCAGGGGCCTATTCATCCGGTACCGCGATGCAACCTGCGGCCGAATGGCGCAAGAGTGCCGCGCGTTTGAGGA AGATCGACGACATGGCACGACGTATCAAACAGCTTGAAAAGCGTGTCGGGGACGTGACCCCTGGCGGTAATGCTTCATCAGAAGGCTGATACCATTTCCA TATCAAGTGTGCGCGGCCGCTAGACGGCCTCCTTGATTTGCTAGCGGGGCGTGCGCCTGGTGCGCCCGCCCCCAATCTTTATTACAGGCTTCCCCCCGAA
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DNA Sequence for Gene |
>PD374_RS19845
ATGATGGACATCAACGAGATTCGCGAATACCTGCCTCACCGTTACCCGTTCCTGCTGGTGGACCGCGTAGTGGACCTCAACGTCGAGGAAAAGCGCATTC GTGCCTACAAGAATGTCAGCATCAACGAACCATTCTTCAATGGTCACTTTCCTGCGCATCCAATCATGCCAGGTGTGTTGATCATCGAAGCCATGGCCCA GGCTGCCGGTATCCTTGGTTTCAAAATGCTCGACCTCAAGCCTGCCGACGGCACGCTTTACTATTTCGTGGGTTCGGACAAGCTGCGTTTTCGCAACCCG GTCACCCCGGGTGACCAGTTGATCCTGGAAGCCAAGTTCATCAGTTGCAAACGCCAGATCTGGAAGTTTGAATGCCAGGCCTCGGTAGATGGCAAGCCGG TGTGCTCTGCCGAGATCATCTGTGCGGAACGCAAACTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTTGATTGACCCTCGCGCAATCATCGATCCGTCGGCCGTACTGGCCGCCGACGTTGAGGTCGGCCCTTGGTCGATCGTCGGCGCAGGTGTGGAAATCGG CGAGGGGACTGTCATCGGGCCGCACGTGATCCTCAAGGGTCCCACCCGAATTGGCAAACACAATCGTATCTACCAGTTTTCCTCAGTAGGCGAAGACACC CCGGACATGAAGTACAAGGGTGAAGAAACACGCCTGGTCATCGGTGACCACAACATCATTCGTGAAGGCGTCACCATTCACCGCGGCACCGTGCAGGATC GCGCCGAAACCACCTTGGGTGATCACAATCTGGTCATGGCCTATGCGCACATCGGCCATGACAGCGTGATCGGCAACCATTGTATTCTGGTCAACAACAC TGCGTTGGCAGGCCATGTGCACGTTGATGACTGGGCGATCCTCTCCGGTTTTACCCTGGTGCATCAATACTGCCACATCGGCGCCCACAGCTTTTCCGGC
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Amino Acid Sequence |
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVDLNVEEKRIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDLKPADGTLYYFVGSDKLRFRNP VTPGDQLILEAKFISCKRQIWKFECQASVDGKPVCSAEIICAERKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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