Pseudomonas sp. WCS374, PD374_RS22045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCCATTGCGCTCGGCCACTTGAGTTGTTTGCCCGTTTTGCCGCGTGTCGGCAGAGGTTTACGGGCCAGGTGCCAGGCTGGGGCAGCCCTTTTTTGAGG TTCACGTCTTCAAAAGAGCGTGAAAAAACGGGTTTTCACAACTTCACAAGAGTGTGGCGAGCAAATGAATAGTTTGGCGTTTGTACAAGCACCATCAGCG TCTGGGTCAGCCCAATTACACAGGATCGAGCCTTCCTCAAAAACCGGAGCTTGAGCCTGTCCGCTACGGATTGGTTGCACGAATCGCACGCTTTGACCAT AAGTCGAATTGCCACAGGCGCCCATGAATGCGTTCATAGGCAGATTAGCCCGGCAGGAAGCGTGTGCTGAAGTTGCAAAGAATTGCGAAACGGACATGGC GATCCTGGCCATGGGTAACCTGGGGCAACACGTGAATCGCCCCGTCACTCCTGGCAGCCATGCCGTCAATTTGGTGCTGCAGATTTTGGAGACGCGTTAA
|
|
| DNA Sequence for Gene |
>PD374_RS22045
ATGGCGCATAACGAAGCAGTCGACGTAGTACTGGTAGGGGCCGGCATCATGAGTGCCACCCTGGCCGTACTGCTCAAAGAGCTCGACCCCAGCCTCACGC TGGAAGTCGTTGAGCTGATGGACTCGGGTGCCGCGGAGAGTTCCAACCCGTGGAACAACGCCGGCACCGGCCATGCCGGGCTGTGTGAGCTGAACTACAC GCCACAGGCCGCCGATGGTTCCATCGACATCAAGAAAGCCGTGCACATCAACACCCAGTTCGAGGTGTCGAAGCAGTTCTGGGCTTACCTGACCAAGAAA GGCACCTTTGGCTCGTCCAAGTCGTTCATCAGCCCGGTGCCGCACCTGAGCTTCGTGCAGGGCGACAAAGGCGTGTCCTTCCTCAAGAAGCGCTTTGAGA CCCTCAGCCAGCACCACGCGTTTTCGGACATGCACTACACCGAAGACCGCAGCGAAATGGCCGAGTGGATGCCGTTGATGATGCCGGGCCGCCCGCTCGA CGAAAAAATCGCCGCCACCCGCGTGATGAACGGCACCGACGTCAACTTTGGCGCCCTGACCAATCAGCTGCTCAGCCACCTGACCAGTTCGCCAGACGCC CAGGTCAAGTACTGCAAGCGCGTAACCGGCCTCAAGCGCAACAGCGCAGGCTGGACCGTGAGCATCAAGGACGTCAACAGCGGTAACAGCCGCGACGTCG ATGCCAAGTTCGTGTTCCTCGGCGCTGGCGGTGCGGCGCTGCCGTTACTGCAGGCCTCGGGCATCGAAGAGAGCAAAGGCTTCGGCGGCTTCCCGGTGAG CGGCCAGTGGCTGCGTTGCGACAACCCGGAAGTGGTCAAGCAGCACCAGGCCAAGGTCTACAGCCAGGCTGCCGTGGGCTCGCCGCCGATGTCCGTGCCG CACCTGGACACCCGCGTGGTGGATGGCAAGAAATCCCTGCTGTTCGGGCCATACGCCGGTTTCACCACCAAGTTCCTCAAGCACGGCTCGTTCCTTGACC TGCCGATGTCGATTCGCGCCGGCAACATCGGCCCGATGCTGGCCGTGGCCCGCGACAACATGGACCTGACCAAGTACCTGGTCAGCGAAGTGCGCCAGTC CATGGAACAGCGCCTGGAATCCCTGCGTCGCTTCTACCCCGAGGCGAAAGCCGAAGACTGGCGCCTGGAAGTGGCCGGCCAGCGCGTGCAGATCATCAAG AAAGACCCGAAGAAAGGCGGCGTGCTGCAGTTCGGCACCGAACTGGTCGCGGCCAAGGACGGTTCGCTTGCGGCACTGCTGGGCGCGTCTCCTGGTGCTT CGGTCACGGTCTCGATCATGCTGGAGCTGATCGAGCGCTGCTTCCCGGAGAAAGCCGCCGGTGAGTGGGCTACCAAGCTGCATGAGATCTTCCCGGCACG CGAGAAAGTGCTGGAGACGGACGCCGAGCTGTATCGCAAGCTCAACACGCAGAACAACATCAGCCTGGAGCTGGTGGAGCAAAGCAACGAGGCTGAAAGC TACGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTCGTGACGCAGAGCGTCACAGAATGCATTCCCACGCAGAGCGTGGGAACGAGCGCGAAACGCCCCGGCCTCTCATGAGGCCGGGGCGTTTTTTTGTGG CTCGGATAATCAGCCGCGGGCGTTGTCGATCAGCTCGATGTATTCGGCGGCGTTGCGCTGGTCTTTGATCAGGTCGACGAAGGTCTGGCCATGCTCGTCC TTGCCGTCCAGGTCCAGGCCTGCTTCTTTGAAAAAGCCCAGGAAACGCTCGAAGTCGTCGATACGCAGGCCGCGATAGGCCTTGATCAGTTTGTGCAGGG ACGGCGACGTCGCATCAACCGGCTCGAAGTCCAGGAACAACTTGATCTGGTCGTCACCGATTTCGTCGCCAATCACCTGTTTCTTATCTTTACGCATTAC CGACTCCAGCCTGCAGACATTTACACGGGGCTTGAAGTCTACCTGCGCGACGCCGGCTTCGAAAGCGGTGAGAAAGCAATGTGGGACGGGGCTTGCTCAG
|
|
| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPSLTLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKK GTFGSSKSFISPVPHLSFVQGDKGVSFLKKRFETLSQHHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAATRVMNGTDVNFGALTNQLLSHLTSSPDA QVKYCKRVTGLKRNSAGWTVSIKDVNSGNSRDVDAKFVFLGAGGAALPLLQASGIEESKGFGGFPVSGQWLRCDNPEVVKQHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSFLDLPMSIRAGNIGPMLAVARDNMDLTKYLVSEVRQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK KDPKKGGVLQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIERCFPEKAAGEWATKLHEIFPAREKVLETDAELYRKLNTQNNISLELVEQSNEAES YA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|