Pseudomonas syringae pv. syringae B728a, Psyr_0012 (glyQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGTAACAGATGGTCGGCCCGACAAAGGTGAAACCGGCCTTTTTCAATGCCTTGCTCATCGCTTCGGCCTCGGCGGTCATCGCCGGGACTTCGCTGCGA TCCTTGAAGTGATTGATCTTCGGAGTACCGCCGACAAACGACCAGAGCAGCGCGACCGGGTCTTCCAGTGCCAGCCAGGCCCGCGCATTGGTGCGCACCG CCTTGAGCTTGAGGCGGTTGCGGATGATGCTCGGATCAAGCATCAGCGCCTCTATTTCGGCATCGCTCAGCTGCGCCAGGCGCTCGACGTCAAAGCCGTG CAGTACTTCGCGATAACGCGCGCGCCGCTTGAGAATCGTGATCCACGACAGCCCGGCCTGGAACCCTTCGAGCAAAAGCAACTCGAAGAGCTTCTGCGCA TCGCGCAGCGGCACTCCCCACTCCTGATCGTGATATGCGATGTACAGGGGGTCTTCGTTGCACCAAAAGCAGCGTGTCATAGGGCTCCCAAGGAGTGGAC
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| DNA Sequence for Gene |
>Psyr_0012
|glyQ
GTGCGGCCGAATCGGGTATACTCCCGCTCTTTGAATCGCAGCCCAGCACAGGTGAAATTTGTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACT TGATCCTCGCCCTCCAGCAATACTGGGCAGAACAAGGTTGCGTGGTACTTCAGCCCTACGATATGGAAGTAGGCGCCGGCACGTTCCACACTGCCACGTT TCTGCGCGCCGTAGGCCCGGAAACCTGGAACGCCGCTTACGTACAGCCAAGCCGTCGCCCGACTGACGGCCGTTACGGCGAAAACCCGAACCGCCTGCAG CACTATTACCAGTTTCAGGTGATTCTCAAGCCGAACCCGGACAACTTCCAGGAACTGTACCTGGGCTCGCTCAAGCACATCGGTCTCGATCCGCTGGTGC ACGACGTGCGCTTCGTCGAAGACAACTGGGAATCGCCGACGCTGGGCGCCTGGGGTCTGGGCTGGGAGATCTGGCTCAACGGCATGGAAGTCTCGCAGTT CACCTACTTCCAGCAGGTCGGTGGTCTGGAGTGCTACCCGGTTACCGGCGAAATCACCTACGGCCTCGAGCGTCTGGCGATGTACCAGCAGGGCGTGGAC TCGGTCTACGATCTGGTCTGGGCTGACGGCCCGTTCGGCAAAGTGACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCGACCTACAACTTCG AACACGCCAACGTAGACAAGCTGTTCGAGCTGTTCGACTTCTACGAAAGCGAAGCCGCACGCCTGATCGAGCTGGAGCTGCCATTGCCCGGCTACGAAAT GGTCCTCAAGGCCTCGCACACCTTCAACCTGCTGGATGCCCGTCGCGCGATTTCCGTGACGGCGCGTCAGCAATACATTCTGCGCGTGCGCACGCTGGCC CGTTCGGTGGCTCAGGCCTACCTGCAGGCCCGGGCCCGTCTCGGCTTCCCGATGGCGCCGCCCGATCTACGCGATGAAGTGTTGGCCAAGCTGGAGGCAG CGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTCAAGATTTTCTGGTCGAACTGGGCACCGAAGAACTGCCACCCAAGACCCTCGTCTCGCTGGCCGATGCGTTTCTCGCCGGTATTGAAAAAGGTCT CGCAGGCGCAGGTCTGACCTACAGCGCCAAACAGGTCTACGCCGCACCGCGTCGTCTGGCCGTGCTGATTACCGCACTGGCCACGCAACAACCGGATCGC AGCGTCAACCTCGACGGCCCACCGCGTCAGGCCGCGTTCGATGCCGACGGCAACCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTCGACC TGAGCGAAATCGATCAGAGCGGTCCGAAACTGCGTTACAGCCAGACCATCCTCGGCAAGCCGACGACGTCGCTGTTGCCGACCATCGTCGAAGACTCGCT GAACGACCTGCCGATTGCCAAGCGCATGCGCTGGGGTGCTCGCAAGGAAGAGTTCGTGCGGCCGACCCAGTGGCTGGTGATGCTGTTCGGTGATCAGGTG
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| Amino Acid Sequence |
>glycyl-tRNA synthetase subunit alpha
MRPNRVYSRSLNRSPAQVKFVSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQ HYYQFQVILKPNPDNFQELYLGSLKHIGLDPLVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECYPVTGEITYGLERLAMYQQGVD SVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANVDKLFELFDFYESEAARLIELELPLPGYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLA RSVAQAYLQARARLGFPMAPPDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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