Pseudomonas syringae pv. syringae B728a, Psyr_0004 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCTTTGAACAGACTTTGAGCGAACTTGTTGAGCTTGAAGGTTTGACCCTGAGCTACTACCGAGGATGGGACAAGGAAAAAGAGCTAAGTACAGTGCTC GCCTCTTCCATCCACCGCGATCAGCAAATGGGCCACACCCAGGCCGGACCACAGCGAGCTGATCTGCGCCTTAGATTAGGCGCGCATAATGCGGCAGATA TTCTGTCTCGCGGTCAGCAAAAGCTGGTGGTCTGCGCACTGCGTATTGCTCAGGGACATCTGGTCAGCCAGGTCCGTCGCGGCCAGTGTATTTACCTGGT AGATGATTTGCCCTCCGAACTGGATGACAACCATCGACGCGCGCTTTGCCGCTTGCTGGAAGAATTACGCTGCCAGGTGTTTATCACCTGTGTAGATCAA GAATTTTTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGATTGC
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| DNA Sequence for Gene |
>Psyr_0004
|gyrB
ATGAGCGAAAACCAAACGTACGACTCGTCCAGCATTAAAGTGCTGAAAGGACTTGATGCCGTACGCAAGCGTCCCGGAATGTACATCGGTGATACAGACG ATGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTTGATAACTCGATCGACGAAGCATTGGCAGGCCATTGCGACGACATCAGCATCATCATCCACCC AGACGAATCTATCACCGTGCGCGACAACGGCCGCGGTATTCCGGTAGACGTGCATAAAGAAGAAGGCGTGTCGGCAGCCGAGGTCATCATGACCGTGCTC CACGCTGGCGGTAAGTTCGATGACAACTCCTACAAAGTATCCGGTGGTTTGCACGGCGTAGGTGTCTCTGTAGTTAACGCCCTTTCAGAGCTTCTGTTGC TGACGGTTCGTCGTAGCGGCAAGATCTGGGAACAGACCTATGTTCATGGTGTTCCACAGGAACCGATGAAGATCGTCGGTGAAAGTGACAGCACAGGCAC TCAGATCCACTTCAAGCCTTCAGCTGAAACGTTCAAGAACATCCACTTCAGCTGGGACATTCTGGCCAAGCGGATTCGTGAACTGTCTTTCCTGAACTCC GGTGTCGGCATTGTCCTCAAGGATGAGCGCAGCGGTAAGGAAGAATTGTTCAAATACGAAGGCGGTCTGCGCGCATTCGTTGAGTACCTGAACACCAATA AAACGCCGGTCAACGAAGTGTTCCACTTCAACATCCAGCGTGATGACGGTATCGGTGTCGAGATTGCTCTGCAGTGGAACGATAGCTTCAACGAGAACCT GCTGTGCTTCACCAACAACATTCCGCAGCGTGATGGCGGTACTCACCTGGTGGGCTTCCGCTCTGCGCTGACGCGTAACCTGAACAACTACATCGAGCAG GAAGGTCTGGCCAAGAAGCACAAGGTCGCGACCACCGGCGATGACGCGCGTGAAGGTCTGACTGCGATCATTTCGGTCAAGGTGCCTGATCCTAAGTTCA GCTCGCAGACCAAGGACAAGCTGGTTTCGTCCGAAGTCAAAACGGCTGTCGAACAGGAAATGGGCAAGTACTTCTCCGACTTCCTGTTGGAAAACCCGAA CGAAGCCAAAGCGGTTGTCGGCAAGATGATCGACGCAGCCCGTGCCCGCGAAGCTGCGCGCAAGGCGCGCGAGATGACCCGTCGTAAAGGCGCGCTGGAT ATCGCTGGCCTGCCGGGCAAACTGGCGGACTGCCAGGAAAAAGACCCTGCCCTCTCCGAACTGTACCTGGTGGAAGGGGACTCTGCTGGCGGATCAGCCA AGCAGGGGCGTAATCGTAGAACTCAGGCCATCCTGCCGCTCAAGGGCAAGATCCTGAACGTTGAAAAAGCGCGTTTCGACAAGATGATCTCTTCGCAGGA AGTGGGCACCTTGATCACTGCGCTGGGCTGCGGTATTGGCCGTGAAGAGTACAACATCGACAAGTTGCGTTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGCTCGCACATCCGTACCCTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCCGAGCTGATCGAGCGTGGCTACATCTACATCGCTCAGCCGC CGCTGTACAAGGTCAAGAAAGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGAAGAATACATGACCCAGTCGGCCCTTGAAGACGCCAGCCT GCACCTCAGCGAATCGGCGCCGGGTATCTCCGGTACCGCACTGGAGAAGCTGGTCAACGACTTCCGCATGGTCATGAAGACGCTCAAGCGCCTGTCGCGT CTGTACCCACAGGAACTGACCGAGCACTTCGTCTACCTGCCGCCGATCACGCTCGAACAACTGTCGGATCACGAGGGCATGCAAGCCTGGCTGGCACTGT TCGACGCGCGTCTGCGCACCGGCGAGAAGTCAGGTCTGGTCTACAAGGCCAGCCTGCGTGAAGACCGTGAACGTAACGTCTGGCTGCCAGAGGTCGAACT GATCTCCCACGGCCTGTCGAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTTACCGCTCTGGGCGCGCAGATCAGCACG CTGCTGGAAGAAGGTGCCTACGTACAACGTGGCGAGCGCAAGAAGCCCGTCAACGAGTTCAAGGAAGCCCTCGCCTGGTTGATGGCCGAAAGCACCAAGC GCCACACCATCCAGCGCTACAAAGGTCTGGGTGAGATGAACCCGGACCAGCTGTGGGAAACCACCATGGACCCGAGTGTGCGCCGCATGCTGAAAGTCAC CATCGAAGATGCCATCGGCGCTGACCAGATCTTCAACACCCTCATGGGTGATGCGGTCGAGCCTCGCCGTGACTTCATCGAGAGCAATGCGCTGGCCGTG TCCAACCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGCGTATGATCAAAACATCAACCCCGGCGAAAGCCGGGGTTTTTGTTTGTGCTCTAAAACAGTTTCGCCAGTCGCAGATTCAAGCGGGACTTTTCCCG GAAGCCCTCCTCCACTTCTACATCCCTGCCGAGTACGGCCTGGACCTGAATCGACGGGGTCAGCATGTGAGTGGCACTCACACGCAGGTAGGTAGTGCTC AGTTGATCGTCTTGATTGACGCCACCCACCCGGTTTTCTCCGCCATCAATATGGCCTCCACCAACGGCAAACCGGGTTTGCGGTGAAACGTTGTAGCTCA GGTAAGCCTGATATTCGTAGCGGGTCTTCTGTGCCAATGTGTCACTGCCTGAACCGTAATCATCGTTATCGCTGAACCATGAGACATCCGCAGCGGTGTC CAGAGCCCATCTGGCATTGAAGTGATGGATGTAGGCTGCTTGCAGCAAAAGACGCCAGCGGTTTTCACCCAGGTTGAGTGTGTCGTCGTTTTCGTAACTG
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVGESDSTGTQIHFKPSAETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQSALEDASLHLSESAPGISGTALEKLVNDFRMVMKTLKRLSR LYPQELTEHFVYLPPITLEQLSDHEGMQAWLALFDARLRTGEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVTALGAQIST LLEEGAYVQRGERKKPVNEFKEALAWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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