Pseudomonas sp. WCS374, PD374_RS23810
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
GCGAGGGCCTGGGGCGCAGCGGCAGGCAAGCTCATCAGGCCGGCAAGGGCAAAAAACAACCAGCGCATGGCGAATGCTCCGTGGTTCACAGCTAGGAAGG TTGAAGCTTGGCCGACGTCGCCGCCGAATACCAGCCCGGCAGAAATACTGAGAACTTGACCTTGCCATCATGGCAAGCTCGACACTGGGCTCAACCTCAT CAAAGGAGTCATGTCATGCAAATATTCAGCGTTGAAGGAATGACCTGCGGCCACTGCGTTAAAGCGGTGACCCAGGCGGTACAGAGCAAGGATCCGGCGG CGAGTGTAAAGGTGGATTTGGCAGCGAAAGAAGTGGGTGTGGAAAGCCGCTTATCTGCAGATGACGTGATCGGCCTGATAACCGAAGAAGGCTACAGCGC CAAGCTGGCGTGATTTTTCTGATCGTTAGCCACCTAACGTAATGTTCATGGCACCCAAGCGCGGCTAGACTGTTGAGCTGCCGACTCACTTGGGTGTCTG
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| DNA Sequence for Gene |
>PD374_RS23810
ATGAACCTTCGCATAATCCTGATTCTGGGCGCCTTGAGCGCCTTCGCGCCGTTGGCGATCGACTTTTACCTGCCGGGCTTTCCGGCAATGGCCACGGCCT TCGCCACTGATGAAAAACATATCCAGCTGACCCTGGCCGTGTATTTCGCGGGCCTGGCTATTGGCCAATTGATCTACGGGCCGCTGGCCGACCGCTTTGG CCGGCGCGTGCCACTGCTCAGCGGCGTCACCCTGTTTACCCTCGCGTCCTTCGCCTGTGCGTATGCGCCGTCCCTGGAATGGTTGATTGGCGCACGCTTC GTGCAGGCCCTTGGCGGATGTGCGGGCATGGTGATTTCCCGGGCGGTGGTCAGCGACAAATGCGATGCCGTGGGCTCGGCCAAGGTGTATTCGCAACTGA TGCTGGTGACCGGCCTGGCCCCGATCCTGGCGCCATTGGCCGGTGGCCTGATGGTCGGCGTGTGGGGCTGGCAGTCGATTTTCCTGGCGTTGTCGTTGTT CAGCGTGATGGCGGCCATCGCCGTGGCGGTCGGGTTGCCGGAAACCTTCCCGGCCGATCAGCCGCGTCAGCCGTTGTCGGGCTCGTTGCGCCGCTACGGC TCGCTACTGTCAGACCGGGTGTACCTGGGCTATGCCTTGACCGGCGGCATCTCGATTGCCGGGATGTTTGCCTACATCGCCGGCTCCCCCTTCGTATTTA TCAAGCTCTATGGCGTGCCGGCCGAGCATTACGGCTGGTTGTTCGGCTCCAACGCCGCGGGCTTTATCCTGGTGGCGCAACTGAACGCAAGATTGCTCGC CAAGCGCGGCCCCGCGTTTTTGCTGTCGCGCACCGTGTGGGTGTACGTGGCGGCGGCGTTGACGCTGTTGGGAATTGCCGCGTTGCGCACCGAGGCGCTA TGGCCGTTGCTGGTGCCGCTGTTTATCTGCATCGCCAGCCTGGGCTGCATTTTGCCGAATACCTCGGCCTGTGCCATGAGCGGGCAGGGGACTCGGGCCG GCAGCGCGTCGGCGTTGCTCGGTTGCATTCAGTTTGGTGTGGCGGCAGGCGCGGCGTCGTTGGTCGGTGTGTTGCACGACGGCACGGCGATGCCGATGGC CATGGTCATCTGCCTCTGCGGGGTGCTGGCGGTGACCATTGCCATGGCGACCCAGCGCCTGCAACGGGCAAGGGCCGTACAGGCGCAGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTTCGGTTCAGCCAGCGGAACGTTGCTGGTTGAGGGGGAAGCGGTGGGGAGCCTGGATCCGGGCCTGCAGCGTGTCGGCGAAGGCGCGGGCCTCGGCTT CACTGCGAAAGGTGATGGCCTCGCCGTCGAGACGAACTTGCCATTGGCTGCCGGGGGATTTTGCTAACGCTTTTATCAGGATTTTCATTGCTGACTTCCT CACGTAAAAGAATCGTGGCAAAGGCGGCCAATATAAACCTGAACGGGCTCATAAATATGACAAGGATCAACTCTCGGACTAATGGTGTCGTCCATTACCT ACGTGGATAACGGACGACACTGACAGCCGTTTTTTCAGAACCCCTCCAGCACGATCTTGCCCTTGGCCTTGCCGCTTTCCAGCAGGGCGTGGGCGCGGCG CAGGTTCGCCGCATTGATCACGCCGAAGTGCTCGCCCACCGTGGTTTTCAGGGTGCCGGCGTCGATCAGTTCGGCCACGCGGTTGAGCAGGTTGTGCTGC
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| Amino Acid Sequence |
>putative transporter-like membrane protein
MNLRIILILGALSAFAPLAIDFYLPGFPAMATAFATDEKHIQLTLAVYFAGLAIGQLIYGPLADRFGRRVPLLSGVTLFTLASFACAYAPSLEWLIGARF VQALGGCAGMVISRAVVSDKCDAVGSAKVYSQLMLVTGLAPILAPLAGGLMVGVWGWQSIFLALSLFSVMAAIAVAVGLPETFPADQPRQPLSGSLRRYG SLLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIKLYGVPAEHYGWLFGSNAAGFILVAQLNARLLAKRGPAFLLSRTVWVYVAAALTLLGIAALRTEAL WPLLVPLFICIASLGCILPNTSACAMSGQGTRAGSASALLGCIQFGVAAGAASLVGVLHDGTAMPMAMVICLCGVLAVTIAMATQRLQRARAVQAQV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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