Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
GTCCCAGGCGCTATATCCAGCCGTCCCACGTGGTGCGCATTGCACCGATGATTTATGGCGGCTCGTTCCGCCGTGATTCCAAACTGGCCGCCGAGCACGC CAGCAAAGTGCGCTCGGCCGGCAAGCTGGGTTACTACTGGCAACTGTTTGCCGGGCTGGGCTGGACCAGCATTCACTGGCTGCACAAGATCCGCCAGCCC ACCCTGGTGCTGGCCGGGGACGATGACCCGCTGATCCCGCTGGTCAACATGCGCATGCTCGCCTGGCGCATCCCCAATGCGCAGTTGCACATCATCGACG ACGGCCACCTGTTCCTGATCACCCGGGCCGAAGCCGTGGCGCCGATCATCATGAAGTTTCTGGAGGAGGAGCGCCTGCGCGCCGTGATACATCCGCGACC GGCGGTGTGAAGGACCACACCACCGCGCAACTTGCCAGGAACCGACTATGGTTCTGGATTGGCGTGCCTGCTTGATGACTTGACGAAGGAGTGTTGGCTC
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DNA Sequence for Gene |
>PD374_RS25080
ATGCGAGAAAGACCCGTGACGAACCCGGCGCCCACCCCCGCTGCGTTCATCAACGCGCAAAATGCGATCACCGGCCTGCGCGGCCGGGACTTGCTGTCGA CCCTGCGTACCGTCGCCGCGCACGGCCTGCGCAACCCGGTGCACACCGCTCGCCACGCCCTGGCCCTGGGCGGCCAGCTGGGCCGTGTGCTGCTGGGTGA GACTGTGCACGAACCCAACCCCAGGGACCATCGCTTCAGCGACCCCACCTGGAAGCTCAACCCGCTGTACCGCCGCAGCTTGCAAGCCTATCTGAGCTGG CAAAAACAGACACGGCAGTGGATCGATGACAGCGCCCTCAGTGACGATGATCGCGCCCGCGCGCAGTTCGCCTTCGCCCTGCTCAACGATGCCGTGTCCC CTTCCAACACCCTGCTCAACCCGCTGGCGATCAAGGAGTTGCTCAACTCCGGCGGCAACAGCGTAGTGCGTGGCGTGAGTAATTTGTTCGAAGACCTGCT GCACAACAACGGTTTGCCGCGCCAGGTCAGCAAGCACGCTTTCGAAGTGGGCAAGACCGTGGCGACCACCCCCGGTTCGGTGGTGTTTCGCAATGAGCTG CTGGAGCTGATCCAATACAAGCCCATGAGCGAAAAACAGTACGCCAAGCCACTGTTGGTGGTGCCGCCGCAAATCAACAAGTACTACATTTTCGACCTGA GCCCGGCCAACAGCTTTGTGCAATACGCGCTCAAAAACGGCCTGCAGACCTTTATGGTCAGCTGGCGTAACCCGGACGTGCGGCATCGCGAATGGGGCCT GTCCACCTACGTGGCGGCGCTGGAAGAAGCGCTCAACGTGTGCCGGGCCATCACTGGCGCCCGCGAGGTCAACCTGATGGGCGCCTGCGCCGGCGGCCTG ACCATCGCCGCCCTGCAAGGCCACCTGCAAGCCAAGCGCCAGTTGCGGCGCATCTCCAGCGCCAGTTACCTGGTAAGCCTGCTCGACAGCCAGATCGACA GCCCCGCAACCCTATTCGCCGATGAACAAACCCTGGAGGCCGCCAAGCGCCGCTCTTACCAGCAAGGCGTGCTGGATGGCCGCGACATGGCCAAGGTGTT TGCCTGGATGCGCCCCAACGACTTGATCTGGAACTACTGGATCAACAATTACCTGCTGGGCAAGGAACCGCCGGCGTTCGACATCCTGTACTGGAACAAC GACAACACGCGCCTGCCCGCCGCCTTGCACGGCGACCTGCTGGACTTCTTCAAGCACAACCCCCTGAGCCACCCTGGCGGCCTGGAGGTATGCGGCACGC CCATCGACTTGCGCAAGGTCGCGGTGGACAGCTTCAGCGTGGCCGGCATCAACGATCACATCACGCCGTGGGACGCGGTGTACCGCTCCACGCAACTGCT GGGTGGCGAGCGGCGCTTCGTGCTGTCCAACAGCGGGCATATCCAGAGCATCCTCAACCCACCGGGTAACCCCAAGGCCAACTACGTCGAGAACCTCAAG CTGAGCAGCGACCCGCGCGCCTGGTATTACGACGCCCAGCACGTCGAAGGCAGTTGGTGGCCGCAGTGGCTGGAGTGGGTGCAAAAACGCTCCGGTGTAC AACGCGAAACCCTCACCGCTCTGGGCAACCAGAATTACCCACCGATGGAAGCGGCGCCGGGCACTTACGTGCGCGTGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTCAAACATCACATTAAGAAGACTGGATGAAGACCCGCGACCGTATCCTTGAATGTGCCTTGCAGTTGTTCAACCACAAGGGCGAACCGAACGTGTCGA CCATGGAGGTGGCCAATGAAATGGGGATCAGCCCCGGTAACCTCTACTACCACTTCCATGGCAAGGAGCCGTTGGTACTGGGGCTGTTCGAGCGCTTTCA ATGCGAGCTGGCGCCGCTGCTCGACCCGCCTGCCGATGCGCAACTGGAGGCTGAGGACTACTGGCTGTTTTTGCACCTGATTGTCGAGCGCATGGCCCAC TATCGCTTCCTCTTCCAGGACCTGTCGAACCTGGCCGGGCGCCTGCCGAAGCTGGCCAAGGGGATCCGCAATCTGCTTACCGCGCTCAAACGCACCCTGG CCTCCTTGTTGGCGCGGTTGAAGGCTGCGGGGCAACTGGTCAGTGACACCCAGGCACTGGGGCAGTTGGTGGAACAGATCACCATGACCCTGCTGTTCTC
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Amino Acid Sequence |
>poly(3-hydroxyalkanoate) polymerase 2
MRERPVTNPAPTPAAFINAQNAITGLRGRDLLSTLRTVAAHGLRNPVHTARHALALGGQLGRVLLGETVHEPNPRDHRFSDPTWKLNPLYRRSLQAYLSW QKQTRQWIDDSALSDDDRARAQFAFALLNDAVSPSNTLLNPLAIKELLNSGGNSVVRGVSNLFEDLLHNNGLPRQVSKHAFEVGKTVATTPGSVVFRNEL LELIQYKPMSEKQYAKPLLVVPPQINKYYIFDLSPANSFVQYALKNGLQTFMVSWRNPDVRHREWGLSTYVAALEEALNVCRAITGAREVNLMGACAGGL TIAALQGHLQAKRQLRRISSASYLVSLLDSQIDSPATLFADEQTLEAAKRRSYQQGVLDGRDMAKVFAWMRPNDLIWNYWINNYLLGKEPPAFDILYWNN DNTRLPAALHGDLLDFFKHNPLSHPGGLEVCGTPIDLRKVAVDSFSVAGINDHITPWDAVYRSTQLLGGERRFVLSNSGHIQSILNPPGNPKANYVENLK LSSDPRAWYYDAQHVEGSWWPQWLEWVQKRSGVQRETLTALGNQNYPPMEAAPGTYVRVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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