Pseudomonas sp. WCS374, PD374_RS26035
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS374. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCGAAAAACGCCGCCGTGGCCAAGGAAGAAACCTTCGGCCCGCTGGCGCCACTGTTCCGCTTCAAAGACGAAGCCGAAGTGATCGCCATGTCCAACGA CACCGAGTTCGGCCTGGCCTCCTACTTCTACGCCCGCGACCTGGGCCGGGTGTTCCGTGTGGCCGAGGCCCTGGAATACGGTATGGTCGGCGTCAACACC GGGTTGATCTCCAACGAAGTGGCGCCGTTCGGCGGCATCAAGGCCTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGGATCGAGGACTACCTGGAAATCA AATACCTCTGCCTGGGTATCTAAGGCACGGGATTGCAGTAAACGCAGAGGGCACGAGAGCGCTGCCCCTTTGCGTGTTTCACATGGTTATTCGCAGTGGC CGGGAAAGCTGTGGCAGTCGATCATCGCATGCTGCCGTAGTTGCCTCCCCGCCACCTATCCTTGAGCCACGCCGCCCGATGAGCGGCGAATGAGGACTTT
|
|
| DNA Sequence for Gene |
>PD374_RS26035
ATGAGCAAGACCAACGCATCCCTGATGAAACGCCGCGAAGCCGCTGTACCGCGCGGTGTTGGCCAGATTCACCCGATCTTCGCCGACTCCGCGAAGAACG CCACCGTGACCGACGTTGAAGGTCGCGAGTTCATCGACTTCGCCGGCGGTATCGCCGTACTGAACACCGGCCACGTACACCCGAAAATCATCGCGGCCGT GACCGAGCAACTCAACAAGCTGACCCACACCTGCTTCCAGGTATTGGCCTACGAGCCCTACGTAGAAGTGTGCGAAAAAGTCGCCGCCAAGGTGCCGGGT GATTTCGCCAAGAAAACCCTGCTGGTCACCACCGGTTCCGAAGCGGTGGAAAACGCCGTGAAGATCGCCCGCGCCGCCACAGGCCGTGCCGGTGTGATCG CCTTCACCGGCGCTTACCACGGCCGCACCATGATGACCCTGGGCCTCACCGGTAAGGTCGTGCCTTACTCGGCCGGCATGGGCTTGATGCCGGGCGGCGT GTTCCGTGCGCTGTACCCCAACGAACTGCACGGTGTGAGCGTCGACGATTCCATCGCCAGCATCGAGCGTATCTTCAAGAACGACGCCGAGCCGCGTGAT ATCGCTGCAATCATCATCGAGCCGGTGCAGGGCGAAGGCGGTTTCTACGTCGCGCCGAAAGCCTTCATGAAGCGCCTGCGCGAACTGTGCGACAAGCACG GCATCCTGCTGATCGCCGACGAAGTGCAAACCGGTGCCGGCCGTACCGGTACCTTCTTCGCCATGGAACAGATGGGCGTTGCCGCCGACCTGACCACCTT CGCCAAATCTATCGCGGGCGGCTTCCCGCTGGCTGGTGTGTGCGGCAAGGCTGAGTACATGGACGCCATCGCCCCAGGCGGCTTGGGCGGCACCTATGCC GGTAGCCCGATTGCCTGCGCCGCGGCCCTGGCCGTGATGGAAGTGTTCGAAGAAGAGCACCTGCTGGACCGCTGCAAGGCCGTGGGCGAGCGCCTGGTGA CTGGCCTCAAGGCCATTCAGGCCAAGTACCCGGTGATCGGCGAAGTGCGTGCCCTGGGCGCGATGATCGCGGTCGAGCTGTTCGAAGACGGCGACACCCA CAAGCCAAACGCTGCCGCCGTTGCCTCCGTGGTGGCCAAGGCACGTGACAAGGGGCTGATCCTGCTGTCCTGCGGTACCTACGGCAACGTATTGCGCGTA CTGGTGCCCCTGACCTCGCCGGACGAGCTGTTGGACAAAGGCCTGGCGATCATCGAAGAGTGCTTCTCCGAACTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CACGCCCGTTCCTACGAAAAACAAAAAAACCGCTTCGGCGGTTTTTTTGTGCCTGCTTCATTGTACGCACGCGCCTGCATTGTCTAAGGTGCAAGCATTG CCGATGGAGCGTGCTGGATGACTGCTGTTGATTTACCCGCTGTACCCCGAGTGTTAATCGCCGAAGCAGACCCTTGGTCGCGGGACCTGCTCAAGCAAGT GCTGTTGAATGTGCGCTGTGACGCACGGCTGGATGTGTGCGCCGATGGGCAACACGCCGCCACGCTGTTGGGCGAAAAAACCTATGACCTGATCTTGGCC GATTGGGAGCTGCCGGGCGTGGATGGCCTGAGCCTGCTGCGCAGCGTGCGCCAGAAACGCCGTTCGCTGCCGTTTATCTTGCTGAGCAGTCGCAACGACA GTGCCAGCGTGCGCGAAGCCTTGCCCTTGGCGCCCACCGCCTACCTGACCCGCCCGCTGAACATGGAAAGCCTGACCCAGCGCCTGCAAGACCTGCTGCT
|
|
| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNASLMKRREAAVPRGVGQIHPIFADSAKNATVTDVEGREFIDFAGGIAVLNTGHVHPKIIAAVTEQLNKLTHTCFQVLAYEPYVEVCEKVAAKVPG DFAKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGVFRALYPNELHGVSVDDSIASIERIFKNDAEPRD IAAIIIEPVQGEGGFYVAPKAFMKRLRELCDKHGILLIADEVQTGAGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA GSPIACAAALAVMEVFEEEHLLDRCKAVGERLVTGLKAIQAKYPVIGEVRALGAMIAVELFEDGDTHKPNAAAVASVVAKARDKGLILLSCGTYGNVLRV LVPLTSPDELLDKGLAIIEECFSEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|