Pseudomonas sp. WCS374, PD374_RS26870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. WCS374. [Details]
DNA Sequence Upstream of Gene
CATCCCAGTTCACCGCCCAGCCGTAGTCGGCGGGGTAGATGTCGCTGGTCAGGCGTTCCTCATAGCCGTGCAACTGGTCGGGGCCGCAGAAGTGCATCTT GCCCGACAGTGCGGTGCGGTAGCCCAGGCGGCGCAAGTAGTGGGCATAGGTCGGCACGTCGGCGGGGAAATCGGCGGCGTTGTCGTAGGCGCCGATCTTG CTCGGCAACTGGCCGCTGACCAAGGTGAAGCGCGACGGTGCGCACAACGGGCTGTTGCAATAGGCAGCGTCGAACACCACGCCTTGTGCCGCCAGGCGGC TGAGGTTGGGCAGCTTGATCGGGGAAGGCCCGTAGAACGGCAGCATCGGCGCGGCCATCTGATCGGCCATGATGAAAAGAATATTCTTGCGCTTCATGGT TTCTCGGCATTCCATAGGCAGTGTTTATGCCAATGAGCATGCGGGCCTTAAATTATGGGGTAAAGCCCATGCACAGCAATGACTAGGATAAGTTGAGCTT
DNA Sequence for Gene
>PD374_RS26870
ATGTATGAAGCGTTGGGTGGCCTCTCTCTCGATTTGCTGCGCGCCTTTGAGGCGGCGGCGCGTCATCGCAGTTTCACCGCGGCCGCGATGGAGCTGGGTA CCACCCAACCGGCGGTCAGCCAGCAAATCAAACGCCTTGAAGAGCAACTGGCGATCCGCCTGTTTGATCGCATTTACCGCGGCATCGAACTGACCGACGC TGGCGCCCTGCTGTTCGAGCATGTGCAAGGCGGCCTGCAGAACATCAATCAGGGCCTCGGCGCCATCACTCAACAAAGCCAGCATGAAGTGCTGCAAGTC GCCACCGACTTTGCCTTCGCCGCCTATTGGCTGATGCCACGCCTGCATCGCTTTCACCAGGCCAACCCGCAGGTGGATGTCAGCCTGGTCACCAGTGAGC GCAACCACGCCACGCTGCGCAGCGATATTGATGTGGCGGTGCTGTTTGGCGATGGCCGTTTCAAGCAGGGCGAAAGCCTGTGGTTGTTCAATGAGGAAGT GTTCCCGGTGTGCAGCCCGCAGTGGCTCAAGGAGCAGGTCGCGCCCCTGACGGTGCAGACCTTGCAAGACTGCCCGTTGCTGCACCTGCGCCAGGAAAAC AACAGCCAGTGGTTCGACTGGAATGGCGTGTTCCGTGAATTGGGTATCACGGCTGCGCCGACCCCTGGGCAATTGCGCTTTGACAACTACACCTTGCTGA TCCAGGCCGCGATTGCCGGCCAGGGCGTCGCCATCGGCTGGCGCCACCTGGTGGATAACCTGCTGGAGCAGAATTGGCTGTGCCGGCCGATCAGCCACAC GGTGACGTCGCGCTTGGGCTATTACGTGGTGCAGCCCCAGCGCAAACGCCGTGGGCAGTTGGTGGACCGATTTGTCGAGTGGCTGGTGGCGGAACAGGCC AGCAGTGCGCAGTCGTTGACCGGGCTGGCCCTGCCGTCGATTGCGGTCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCGGCGCACAGTGGAACCGGAGTCTGCCATGCAACGTATCAAGGGCTACCACGCCCATATCTACTTCGATGCCAGCACGATCGAGCAGGCGCGCACGC TCTGTGAAGACGCCGCCAAGTTGTTCCCGCTGCGCATGGGCCGCGTGCACGAGCGGCCCGTGGGCCCGCACCCGGATTGGAGTTGCCAGTTGGCGTTCGA GCCGGAATATATCGGCGTGGTGTTGCCGTGGCTGGCGCTGCATCGCAATGGTCTGGTGGTGTTCCTGCACCCTGAAACCGGTGACGACCTCAAGGACCAC ACCGATTACGCCATCTGGATGGGTGCGATGCGCGAACTGGACCTGTCTATTTTTTAGCCTTTCCTACCCGATAATCCTGCGTCTTTCCCTAAGTAAAAAC AGGATGAGTTGTAGAATTAATCTTGTCTTGTCTCATTATATGGGATTGATATTTATATATTGAGATATTCCGCGCCCTAGGTTTATATTCGCCCATCTGC
Amino Acid Sequence
>LysR family transcriptional regulator
MYEALGGLSLDLLRAFEAAARHRSFTAAAMELGTTQPAVSQQIKRLEEQLAIRLFDRIYRGIELTDAGALLFEHVQGGLQNINQGLGAITQQSQHEVLQV ATDFAFAAYWLMPRLHRFHQANPQVDVSLVTSERNHATLRSDIDVAVLFGDGRFKQGESLWLFNEEVFPVCSPQWLKEQVAPLTVQTLQDCPLLHLRQEN NSQWFDWNGVFRELGITAAPTPGQLRFDNYTLLIQAAIAGQGVAIGWRHLVDNLLEQNWLCRPISHTVTSRLGYYVVQPQRKRRGQLVDRFVEWLVAEQA SSAQSLTGLALPSIAV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site