Pseudomonas chlororaphis EA105, NZ35_RS11030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGATCCTCAAGGAGAACGGCGACAGCTTCAACATCAAGGATCTGCTGCGCCCGGCCACCTTCGTGCCGGAGTCCAAGCGTCTGAACGTGTTGCTGCGTG AGTTCCGCGCCAACCACAACCACATGGCCATCGTCATCGACGAATACGGCGGTGTGGCCGGTCTGGTAACGATTGAAGACGTACTGGAGCAGATCGTCGG CGACATCGAAGACGAGCACGACGTCGAAGAAGACAGCTACATCAAGCCACTGCCAAGTGGCGACTTCCTGATCAAGGCCCTGACGCCGATCGAGAACTTC AACGAGTTTTTCGACAGCGAGTTCTCTGATGACGAGTTCGACACTGTCGGTGGCTTGGTGATGAGCGCGTTCGGGCACTTGCCAAAACGCAACGAAATCA CTGAAATCGGCGCCTATCGTTTCCGCATCCTGAACGCCGACAGCCGTCGGATTCATTTGCTGCGACTGACGCCAATTGCTCGTTAATTCTAAGGACTGAA
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| DNA Sequence for Gene |
>NZ35_RS11030
ATGCGCTGGACAACCCGCCCCGGCTGGCCCGGTAACCTGCTGGCCGTGGCGGCCGGTGCAATCACCACGTTCGCTCTGGCACCGTTCAACATCTGGCCGC TGGCTCTGCTGGCGGTCGGCTTGTTCTATGCCGGTTTGCGCGAGCTGAGTCCGCGTCAGGCGCTGGGCCGTGGCTGGTGCTTCGGTTTCGGCCTGTTCGG CGCCGGCACCAGCTGGATCTATTACAGCATCCACCATTTCGGCGGCGCTTCGGTGCTGCTGGCTGGCTTCCTGATGCTGCTGTTTACGGCGGCGATTGCC TGGTTCTTTGCCCTGCCGGCCTGGCTGTGGGCGCGCTGGTTGCGCCGTAACGAAGCGCCCGTGGCGGATGCTTTGGCGTTTGCTGCGTTGTGGGTCGGAC AGGAAGCCTTTCGTGGCTGGTTCCTCACGGGTTTCCCGTGGCTGTATTCCGGTTACAGTCAACTCGACGGGCCGCTGTCCGGACTCGCGCCAGTCGGTGG CATGTGGCTGGTGTCGTTCGTGCTGGCATTGACTGCGGCGCTGATCTACAACGCGCCGCGTCTGCTGCAAACCGGCCGCAAAGGTTTTGTTGCCGCAGGT CTGGTGCTGCTGGCTGGACCATGGGTGGCCGGCATTGCGCTCAAGGGCCACGCTTGGACCAGCCCGTCCGGCGCCCCATTGAGCGTTGCAGCTATTCAGG GCAACGTCGCGCAGAGCATGAAATGGGACCCGGCCGAGCTCAACGCGCAGTTGGCGCTTTACCGCGATCTGAGTTTCCGCTCGAAACCGGTAGACCTGCT GATCTGGCCGGAAACGGCTGTGCCGGTATTGAAGGAGTCCGCCGAGGGCTACCTGAGCATGATGGGCACCTTCGCCGCCGAGCGTAAATCGGCGCTGATC ACCGGCGTGCCGATCCGCGAAACGGTTCGTCACGAAAAACGCTTCTTCAACGGCATCACCGTGGTCGGTGAAGGCGATGGCACTTACCTGAAACAGAAAC TGGTGCCGTTTGGTGAATACGTGCCGCTGCAAGATGTATTGCGCGGGCTGATCGCCTTCTTCGACCTGCCAATGTCCGACTTTGCCCGTGGCCCGGCGGA TCAGGCACTGTTGCAGGCCAAGGGTTATCAGATCGCACCGTTTATCTGCTACGAAGTGGTGTATCCGGAGTTTGCCGCCAGCCTGTCGGCGCGCAGTGAT CTTCTGCTGACGATCAGCAACGACACCTGGTTCGGCACCTCGATTGGCCCGCTGCAACATTTGCAGATGGCGCAAATGCGTGCACTGGAAGCCGGGCGCT GGATGATCCGCGCGACCAACAACGGCGTGACCGGGCTGATCAACCCGTTCGGGCAGATCACCGAGCAGATTCCGCAGTTTGAACAGGGCATTCTGTACGG CGAAGTGGTGCCGATGCACAACCTGACGCCGTATCTGCAATGGCGTTCGTGGCCGCTGATCATCCTGTGCGTGCTGCTGTTTGGCTGGGCACTGATGGCC AGCCGGATGTCGAAAACCCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCCCCCGACAATGATCGTTCCCACGCTCCGCGTGGGAGCGCCGCCGGGGACGCTCCGCGTTCCGCTTCGGATGTGGCGCAGAGCGTGGGAACGATCAA TCACCGCGGTAGAACAACGAATACCCCACCTGCCCCACCGCCTCGTTCAGCAACTGCCCGCTCTGCCAGATCGACTTGAACTCCGGCAGCCAGCCACCAA ACGGTCTTGCGTTATCGGTACCGAGAAACCCGACCGGCGCCGGCACCACTTCAAATCCCGCCTGTTGAAAACTCCACACCGAGCGCGGCATGTGCCAGGC CTGAGTCACCACGACCACGCGCTTGATTCCCTGCGGCAGCAAGATATCGGCGCTGAAGCTGGCGTTTTCCCAGGTGGTGCGGCTTTCGCCTTCCTGCCAA CGCACCGCTACGCCGAAATCGTCGCGCAACGAATCGGCCATCAGTTTTGCCTCGGTTGGCGGCGTTCCATAGTGCAGCCCGCCCGTGGTCAGGATCGGTA
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| Amino Acid Sequence |
>acyltransferase
MRWTTRPGWPGNLLAVAAGAITTFALAPFNIWPLALLAVGLFYAGLRELSPRQALGRGWCFGFGLFGAGTSWIYYSIHHFGGASVLLAGFLMLLFTAAIA WFFALPAWLWARWLRRNEAPVADALAFAALWVGQEAFRGWFLTGFPWLYSGYSQLDGPLSGLAPVGGMWLVSFVLALTAALIYNAPRLLQTGRKGFVAAG LVLLAGPWVAGIALKGHAWTSPSGAPLSVAAIQGNVAQSMKWDPAELNAQLALYRDLSFRSKPVDLLIWPETAVPVLKESAEGYLSMMGTFAAERKSALI TGVPIRETVRHEKRFFNGITVVGEGDGTYLKQKLVPFGEYVPLQDVLRGLIAFFDLPMSDFARGPADQALLQAKGYQIAPFICYEVVYPEFAASLSARSD LLLTISNDTWFGTSIGPLQHLQMAQMRALEAGRWMIRATNNGVTGLINPFGQITEQIPQFEQGILYGEVVPMHNLTPYLQWRSWPLIILCVLLFGWALMA SRMSKTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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