Pseudomonas chlororaphis EA105, NZ35_RS27930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_51, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTTGATGCTGACCGCGCGCAACGATGAAACCGACCGCATCATCGGTCTGGAAATGGGCGCCGACGATTACCTGACCAAACCGTTCGCCGCCCGCGAAC TGCTCGCGCGGATCAACGCCGTGCTGCGCCGCACGCGGATGCTGCCACCGAATCTGGTGGTCACCGAAGCCGGTCGATTGCTGGCTTTCGGCCGTTGGCA ACTGGACACCTCGGCCCGCCACCTGCTCGACAAGGATGGCACCATGGTCGCCCTCAGCGGCGCCGAATACCGTTTGCTGCGAGTGTTCCTCGATCACCCG CAACGGGTACTCAGCCGCGATCAACTGCTCAATCTCACCCAAGGACGCGACGCGGATCTGTTCGACCGCTCGATCGATTTGCTCGTCAGCCGTTTGCGTC AACGTCTGCTCGATGATGCGCGCGAGCCGGCCTACATCAAGACCGTGCGCAGCGAGGGCTACGTATTCTCGCTGCCGGTCGAAATTCTCGGTGCCCCGGC
|
|
| DNA Sequence for Gene |
>NZ35_RS27930
ATGAGCGTCAATCTGCACTGGCCGCGCACCCTCGCCTCGCGCCTGTCGCTGATTTTCCTGATCGGCCTGCTGCTCGCCCAGGCGCTGTCGTTCGGCGCGC AGTATTACGAGCGTTATCAAAGCGCCAAGAACACCATGCTCGGCAATCTGCAAACCGATGTCTCGACCTCGATTGCGATCCTTGATCGCTTGCCTGCCGA AGAGCGCCCTGCCTGGCTCGAGCGTCTGGCGCGAAAAAATTATGGCTACCTGTTGAGCGAAGGCGAACCGGGCACGCCGATTGAGGCCAGGGATGTGCCT GTGGCCGTTACCTCGATCACCGAAGCCATTGGTGATCGCTATCCGCTGACCTTCACCGACATTCCCGGGCCGAAGAAACACTTTCAGGGCCATCTGCGCC TGAGTGACGGCAGCCCGGTGACCATCGATGTGCGCCCCGCCATGGTCCCGTTGTCGCCCTGGTTGCCGGTTGTCTTGCTCGGGCAACTGGCGTTGATGAT CGCCTGCACCTGGCTGGCGGTGCGTATTGCAATTCGTCCGCTGACGCGCCTCGCCAATGCAGTGGAAACTCTTGACCCCAACGCCCACCCGATCAACCTC GACGAAAGCGGCCCGAACGAAGTGGTTTACGCCGCGCGGGCGTTCAACGCGATGCAGGCGCGCATCGCCGCCTACCTCAAAGAACGCATGCAACTGCTGG CGGCGATTTCCCATGACCTGCAAACGCCGATCACGCGGATGAAACTGCGCGCCGAGCTCATGGACGATTGCACCGAGAAAGACAAACTGTGGAATGACCT CAGCGAGATGGAACATCTGGTTCGCGAAGGCGTGGCGTATGCACGAAGCATCCATGGTTCGACCGAGGAAAGCCGCCGCACCAATATGGATTCCTTTCTC GAAAGCCTGGTGTTCGACTATCAGGACATGGGCAAGCAGGTGCAACTGGTCGGCAAGAGTGCAGCCGTCATTGATACCCGGCCTCATGCGTTGCGCCGGG TGCTGGTGAACCTCACCGACAACGCGCTGAAATTCGCCGGTGCTGCCGAAGTCTGGGTCGAAGCCAACAAGGGCAACCTGGCAATCACCGTTATGGATCG TGGCCCGGGCATCGCAGAAGCCGAACTGGCGCAGGTGCTGCAACCGTTCTATCGCGTGGAAAACTCACGCAATCGCGACACCGGCGGCACCGGCCTGGGA TTGGCCATCGCTCAGCAACTGGCCATGGCGCTGGGTGGTTCGCTGACCTTGAGCAATCGCGAGGGTGGCGGTTTGTGCGCGGAACTGAAACTCCCCCTGC ACCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAACAGCGAAAGTTCTTGTGGGAGCGAGCTTGCTCGCGAAGGCGTCCTGTCAGTCGATGTTCAAGTTGACTGACAGATCGCTTTCGCGAGCAGGCTCGCT CCCACAGTGCGCGGCGCAATATTAGTACTCAAGGTGCCAGACCGATCACCTGGTCCTCATGCATCTGCCGCAACAACACCAGGCCGTTGTCCATGAAAGA ATTGCCGGCAGACTGCCCGGCTTCCTGCGCCAGACCTTTCAACTGCTCGCGCCCCGTCAACGACGCAAACTCAGTGATGCGCTGCAACAACCGCCAAGCC AACGGACTCAGCCCGGAAAACTTCACACTCCAGTCCGCCGCACGCCGCACCAGCAACAGCGTCGGTTGAGCCGGTGGTGTGACGGGCTGATTGTTCGGAT CAAGTTCATGCACCGGCCACGCATAAGCCAACGGCCAGGCCAGTGCCGAGATCTGCAACGGGCGCTCCAGCAACAGCGCCGGATCGGTCGCCGGCAGCGC
|
|
| Amino Acid Sequence |
>ATPase
MSVNLHWPRTLASRLSLIFLIGLLLAQALSFGAQYYERYQSAKNTMLGNLQTDVSTSIAILDRLPAEERPAWLERLARKNYGYLLSEGEPGTPIEARDVP VAVTSITEAIGDRYPLTFTDIPGPKKHFQGHLRLSDGSPVTIDVRPAMVPLSPWLPVVLLGQLALMIACTWLAVRIAIRPLTRLANAVETLDPNAHPINL DESGPNEVVYAARAFNAMQARIAAYLKERMQLLAAISHDLQTPITRMKLRAELMDDCTEKDKLWNDLSEMEHLVREGVAYARSIHGSTEESRRTNMDSFL ESLVFDYQDMGKQVQLVGKSAAVIDTRPHALRRVLVNLTDNALKFAGAAEVWVEANKGNLAITVMDRGPGIAEAELAQVLQPFYRVENSRNRDTGGTGLG LAIAQQLAMALGGSLTLSNREGGGLCAELKLPLHP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|