Pseudomonas chlororaphis EA105, NZ35_RS09765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATCACCGATGTGCTGGTTCGGTGGCTACGAAGGCGCGCCGACCAAAGCCTTCGTCGGCAATTACTACCTCAGTGGCGACACCGTGGAATGGAACCCGGA CGGCAGCATCAGCTTCGTTGGCCGCAGCGATGATGTGATCACCACCTCCGGCTACCGCGTCGGCCCGTTCGATGTGGAAAGCGCGCTGATTGAACACCCG GCGGTGGTCGAAGCGGCGGTGGTCGGCAAACCGGATCCGGAACGCACCGAGCTGGTCAAAGCTTTCGTCGTGCTGAGTGCGCAATACCGTGCGGCTCCGG AGTTGGCCGAAGAGCTGCGCCAACATGTGCGCAAACGGCTGGCCGCGCACTCATACCCGCGTGAAATCGAATTTGTCAGCGAATTGCCCAAGACCCCGAG TGGCAAATTGCAGCGCTTTATCTTGCGCAATCAGGAAATCGCCAAGGCTCAAGAGGCCGCGGCGCATAACGTTTCAGCTTGAAGATCAGGAACTACTGTC
DNA Sequence for Gene
>NZ35_RS09765
ATGCAGATCGAGAACAAGGTTTTTATCGTCACCGGCGGCGCATCCGGCCTGGGTGCTGCCACCGCTGAATTGCTGGTCAGTGCCGGCGCCAAAGTGATGC TGGTGGACATGAACGCGGAAGCGGTCGCCGCGCAGGCTCAGCGTCTGGGCGCGCAAAGTGTGGTCGCCGACATCAGCAACGAAGCCGCCGCCGAAGCTGC CGTGCAGGCGACCGTCAAAGCCTTCGGCAGCCTCAACGGTCTGGTCAACTGCGCCGGCATCGTTCGTGGTGAGAAGATCCTCGGCAAGAACGGCCCGCAC GCGCTGAGCAGTTTTGCCCAAGTGATCAACGTCAACCTGATCGGCAGCTTCAACATGCTGCGTCTGGCCGCTGCGGCGATTGCCGAGAGCGAAGCCAACG CGGACGGCGAGCGCGGTGTGATCATCAATACCGCTTCGGTCGCAGCGTTCGACGGCCAGATCGGCCAAGCGGCGTACTCGGCTTCCAAGGGCGCGATCGC CAGCCTGACCCTGCCAGCCGCCCGTGAACTGGCGCGCTTCGGCATCCGTGTGATGACCATTGCCCCCGGCATTTTCGAAACGCCGATGATGGCCGGCATG ACCCCGGAAGTCCGCGATTCGCTGGCCGCCGGCGTACCGTTCCCGCCACGTCTGGGCAAGCCTGCTGAGTACGCCGCGCTGGTTCGGCATATCATCGAAA ACAGCATGCTCAACGGCGAGGTGATCCGTCTCGACGGCGCCTTGCGCATGGCCGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGATTTGTCATGACTATTTCCAACGATCCGATTGTTATCGTCAGCGCCGTGCGCACGCCAATGGGCGGTTTTCAGGGCGAACTGAAGAGCCTCACCG CGCCGCAACTCGGTGCTGCGGCGATCAAGGCTGCGGTTGAACGCGCCGGTGTCGCCAGCGATGCAGTCGATGAAGTGTTGTTCGGTTGCGTATTGCCTGC GGGCCTCGGTCAGGCGCCTGCGCGTCAGGCTGCTTTGGGCGCCGGGCTGGATAAATCGACCCGTTGCACCACGATCAACAAGATGTGCGGCTCGGGCATG GAAACCACCATTCTCGCTCACGACATGCTGGTGGCTGGCAGCGCCGATGTGGTGATTGCCGGTGGTATGGAAAGCATGTCCAACTCGCCGTATCTGCTGG ATCGCGCTCGCGCCGGTTACCGCATGGGCCATGGTCGCGTGCTTGATTCGATGTTCCTCGACGGCCTCGAAGACGCCTACGACAAGGGGCGCCTGATGGG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIENKVFIVTGGASGLGAATAELLVSAGAKVMLVDMNAEAVAAQAQRLGAQSVVADISNEAAAEAAVQATVKAFGSLNGLVNCAGIVRGEKILGKNGPH ALSSFAQVINVNLIGSFNMLRLAAAAIAESEANADGERGVIINTASVAAFDGQIGQAAYSASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMAGM TPEVRDSLAAGVPFPPRLGKPAEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site