Pseudomonas chlororaphis EA105, NZ35_RS26235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGACTGCCCTGCGCATCGAGCACTGAATAGAAGTCTTTCTGCTGCCAGGCACGTTTGCCAAAGGCGTCGTAGAACAGCCGAGTGGTCGGTGCCGCTTGTG TGCGCTCGCCATCGTAGACCGGCATTTTGCTCGCACCACGGGCGGCGCCTTCGCCACTGCCCAGGTTCAACTGGCAGGCCGAGTCGTAGCAGGCATGGCA AGCCACGCACTTCTCGGTGAAGATTGGCTGGATGTCGCGGACGTAAGAAATCGAAGGAGAAATGGCCGGTGCAGTCGCTGGCTCTTGCGCCACGGCGCCC CAGCTGAGAAACAGCAACACAAAACCAATGACGCGGTAAGACATGCTGCTGATCCCGATTGTTAAAAAAAACGCCGCGATTCTACAGTATGACGCTCGTA CCAACATGAGCGATATTCATGAAAAAGCCCCACATGCTCTAAAAGCGCACAGGTTTGCTATGATCCCGCTCCTTCGTAATGGTCTTTCCGAGTAGTCCAA
DNA Sequence for Gene
>NZ35_RS26235
ATGTCCGATCGCAGCGTCCGCCTTCAAGCTCTCAAGCAAGCTCTCAAAGAGCGCATCCTGATACTCGATGGCGGCATGGGCACGATGATCCAGAGCTACA AGCTCGAAGAGCAGGATTATCGCGGCAAACGCTTCGCGGATTGGCCTAGTGACGTCAAGGGCAACAACGACCTGCTGGTGATCACCCGTCCGGACGTGAT CGGCGGCATCGAGAAAGCCTACCTGGATGCCGGTGCCGACATCCTCGAAACCAACACTTTCAACGCCACGCGCATTTCCATGGCCGACTACGGCATGGAA GAACTGGCCTACGAATTAAACGTAGAAGGCGCACGTCTGGCGCGCAAGATTGCCGACGCCAAGACCGCCGAGAACCCGGCCAAGCCACGTTTCGTCGCTG GCGTGCTCGGTCCTACGAGTCGCACCTGTTCCCTGTCGCCGGACGTCAACAACCCCGGCTATCGCAACGTCACCTTCGATGAGCTGGTGGAAAACTACAC CGAAGCCACCAAAGGTCTGATCGAGGGCGGCGCCGACCTGATCCTGATCGAAACCATTTTCGACACCCTCAACGCCAAAGCGGCGATCTTCGCCGTGCAA GGTGTGTTCGAAGAGCAGCACATCGAACTGCCGATCATGATTTCCGGGACCATCACCGACGCCTCCGGCCGTACCCTCTCGGGCCAGACCACCGAAGCGT TCTGGAACTCGGTGGCGCACGCCAAGCCAATTTCCGTCGGCCTCAACTGCGCGCTCGGCGCCAGCGAGTTGCGTCCGTACCTGGAAGAGCTGTCGAACAA GGCCAGCACCCACGTATCCGCGCACCCGAACGCCGGCCTGCCGAACGAATTCGGCGAATACGACGAACTGCCGTCGGAAACCGCCAAAGTCATCGAAGAA TTCGCCCAGAGCGGCTTCCTCAACATCGTCGGCGGCTGCTGCGGCACCACGCCGGGGCACATTGAAGCGATCGCCAAAGCCGTCGCCGGTTACGCGCCGC GTCAGATTCCGGACATTCCCAAGGCTTGCCGCCTCTCGGGTCTGGAACCGTTCACCATCGATCGCAGTTCGTTGTTCGTCAACGTCGGCGAGCGCACCAA CATCACCGGTTCCGCCAAGTTCGCCCGTCTGATCCGTGAAGACAACTACACCGAAGCGCTGGAAGTCGCCTTGCAACAGGTCGAAGCTGGCGCGCAGGTG ATCGACATCAACATGGACGAAGGCATGCTCGATTCGAAGAAGGCCATGGTGACCTTCCTCAATCTGATCGCCGGTGAACCGGACATCTCGCGCGTGCCGA TCATGATCGACTCGTCGAAATGGGAAGTGATCGAAGCCGGCCTCAAGTGCATTCAGGGCAAGGGCATCGTCAACTCGATCAGCATGAAAGAAGGCGTCGA GCAGTTCATCCACCACGCCAAACTGTGCAAGCGCTATGGCGCCGCCGTTGTGGTGATGGCGTTCGACGAAGCCGGCCAGGCCGACACCGAAGCGCGCAAG AAAGAAATCTGCAAACGCTCCTACGACATTCTGGTCAACGAAGTCGGCTTCCCGCCGGAAGACATCATCTTCGACCCGAACATCTTCGCCGTCGCCACCG GTATCGAAGAACACAACAACTACGCTGTGGACTTCATCAACGCCTGCGCCTACATCCGCGACGAACTGCCGTACGCACTGACATCGGGCGGCGTGTCCAA CGTATCGTTCTCGTTCCGTGGCAACAATCCCGTGCGTGAGGCGATTCACTCGGTGTTCCTGCTGTACGCGATCCGCGCGGGCCTGACCATGGGCATCGTC AACGCCGGTCAGCTGGAGATTTACGACCAGATCCCGCAAGAGCTGCGCGACGCCGTTGAAGACGTGATCCTCAACCGCACGCCGGAAGGCACCGACGCCC TCCTCGCCATCGCCGACAAGTACAAGGGCGACGGCAGCGTCAAGGAAGCCGAGACCGAAGAGTGGCGCAGCTGGGAGGTCAACAAGCGTCTGGAGCATGC GCTGGTCAAGGGCATCACCACGCACATTGTTGAAGACACCGAAGAATCGCGTCAGTCGTTCGCGCGCCCGATCGAAGTGATCGAAGGCCCGCTGATGTCG GGCATGAACATCGTTGGCGACCTGTTCGGCGCCGGCAAAATGTTCCTCCCGCAAGTGGTGAAATCCGCCCGCGTGATGAAGCAGGCCGTGGCGCACTTGA TCCCGTTCATCGAACTGGAAAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTCATGGCCACGGTAAAAGGTGACGTGCACGACATCGGCAAGAACAT CGTCGGCGTGGTACTCGGTTGCAACGGCTATGACATCGTCGATCTCGGCGTGATGGTGCCGGCAGAGAAGATTCTGCAGGTGGCCAAAGAGCAGAAGTGC GACATTATCGGCTTGTCCGGTCTGATCACGCCGTCGCTGGACGAGATGGTCCACGTTGCCCGTGAGATGCAGCGTCAGGACTTCCATCTGCCCCTGATGA TCGGTGGCGCGACCACTTCCAAAGCGCACACCGCGGTGAAGATCGAACCGAAGTACAGCAACGATGCCGTGGTTTACGTGACCGACGCCTCCCGCGCCGT GGGCGTGGCCACACAGTTGCTGTCGAAAGAATTGAAAGCAGGTTTTGTTGAAAGAACCCGTGCCGAATACGTTGAAGTGCGCGAACGTACCGCCAACCGC AGCGCCCGCACCGAGCGCCTGAGCTACGCCGCAGCCATCGCCAAGAAGCCACAGTTCGACTGGGCGACTTATGAGCCGGTCAAACCGACCTTCACCGGCA GCAAGGTGCTGGACAACATCGACCTCAAGGTACTGGCCGAATACATCGACTGGACGCCGTTCTTCATCTCCTGGGATCTGGCCGGCAAGTTCCCGCGCAT CCTCGAAGACGAAGTCGTCGGTGAGGCCGCCACCGCGCTGTACAAGGACGCGCAGGAGATGCTCGCCAAGCTGATCGACGAGAAGCTGATCAGCGCCCGT GCAGTGTTCGGCTTCTGGCCGGCCAATCAGGTGCATGACGACGACATCGAATTGTACGGCGATGACGGCCAGCCATTGGCCAAACTGCATCATCTGCGTC AGCAGATCATCAAGACCGACGGCAAACCAAACTTCTCGCTGGCCGACTTTGTTGCCCCGAAGGACAGCGAAGTGACCGATTACGTCGGCGGTTTCATCAC CACCGCCGGCATCGGCGCCGAAGAAGTCGCCAAGGCTTATCAGGACGCGGGCGACGACTACAACTCGATCATGGTCAAAGCGCTGGCCGACCGTTTGGCC GAAGCCTGCGCCGAATGGCTGCACCAGCAAGTGCGTAAAGAGCACTGGGGTTACGCCAAGGACGAAGTGCTCGACAACGACGCGCTGATCAAAGAACAGT ACAGCGGCATCCGCCCTGCACCGGGTTACCCGGCGTGCCCGGATCACACCGAGAAAGCGGCACTGTTCGCCCTGCTCGATCCGGAAGCTGAAGAAATGCG CGCTGGCCGTAGCGGTGTGTTCCTCACCGAGCATTACGCGATGTTCCCGGCGGCAGCGGTCAGCGGCTGGTACTTCGCCCATCCGCAGGCGCAGTACTTT GCGGTGGGCAAGATCGACAAGGATCAGGTCGCCAGCTACACCTCGCGTAAAGGCCAGGAACTCAGCGTGACTGAACGCTGGTTGGCGCCAAACCTCGGCT ACGACAACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGCCTCCGCCAGCGCCTACAGGTGCCCGCGTCGTTCACAAATTTTGTGAACCAACGCTAAACCTGTGGGAGCTGGCTTGCCAGCGATGGCGTCGGGTC TACCAACATTGATGTCGCGTGTGCCGGCCTCATCGCTGGCAAGCCAGCACCCACAGGGTTTCGGGGACGCTCGCTCCCCCCTCTCTCCTACCCATTCCCC ACATTTGTTTTTGCAGTGCTCTTGAAAGGGTTGGCTATGCTTGTCTGACACACACGGCAGACGAGGGATTTATGGACGATCCAGTCGACAACAAACCGCC GACCTTCTGGCAGATGCTGCACAGCGTGATGGCGGCGGCGTTCGGGGTGCAGAGCGGCAAGAACCGGGCAAGGGACTTCACCCATGGCAAGCCCAGCCAT TTCGTGCTACTGGGAATTCTGTTTACGGCAGTGTTTGCGTTGACGCTGTTTGCCATCGTCAAACTGGTGCTGCATTTCGCCGGGGTCTGACGTTGGTCAG
Amino Acid Sequence
>methionine synthase
MSDRSVRLQALKQALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVITRPDVIGGIEKAYLDAGADILETNTFNATRISMADYGME ELAYELNVEGARLARKIADAKTAENPAKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTLNAKAAIFAVQ GVFEEQHIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGASELRPYLEELSNKASTHVSAHPNAGLPNEFGEYDELPSETAKVIEE FAQSGFLNIVGGCCGTTPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQV IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAFDEAGQADTEARK KEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRAGLTMGIV NAGQLEIYDQIPQELRDAVEDVILNRTPEGTDALLAIADKYKGDGSVKEAETEEWRSWEVNKRLEHALVKGITTHIVEDTEESRQSFARPIEVIEGPLMS GMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKILQVAKEQKC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVERTRAEYVEVRERTANR SARTERLSYAAAIAKKPQFDWATYEPVKPTFTGSKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPRILEDEVVGEAATALYKDAQEMLAKLIDEKLISAR AVFGFWPANQVHDDDIELYGDDGQPLAKLHHLRQQIIKTDGKPNFSLADFVAPKDSEVTDYVGGFITTAGIGAEEVAKAYQDAGDDYNSIMVKALADRLA EACAEWLHQQVRKEHWGYAKDEVLDNDALIKEQYSGIRPAPGYPACPDHTEKAALFALLDPEAEEMRAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF AVGKIDKDQVASYTSRKGQELSVTERWLAPNLGYDN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site