Strain | Pseudomonas chlororaphis strain EA105 contig_33, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGTGGTTTCCAGTGCCGACAAAGTACCCAGCGTGGCCGGATGCACTTTGTTGCAGACGCTTTGATAGCCACCCTGAAAGAAGTCCTTCTGTATCGACTT GCGCATCTCCAGCAGCACACCTTGCAGATTGACCTGATGCCCCTTCTCAACCTGAGTCATGGTCAATTCCATCACCATCACCTGATTGCCATCGGCGTCG TTCTTGACCGCACGCTGGCGGGAAACCTGCGCAGCCGCCTCAGGCAGCGCCTCGACTTGCCAACCATCCGGCCACGTGATGCTAGGTTCGTCCGCTGACG CGCACACCGCCACAAGCGACAATAAAGAAAAAACAAACACGGATTTGAAGAGTCGGATCATTGCCGGGCGCACTCGCAGATTGAGCGGTAAAGTCTGAGG CTCGCCCGCACGCAGGGCAAGTCTGCCCTTTCATTTGGCGATGCCGACAGGCATGCGTATCATTGCGCCCATTCACTCGCCCATAGTTATTGGAGGGCCC
|
|
DNA Sequence for Gene |
>NZ35_RS24795
ATGAGCCTGCACGAACTCAACACTTTCCCCGGCGTTACCGCTACGCCAGACAGCGCAACCCGAAACTTCGTTTTCAACCACACCATGTTGCGTGTGAAAG ACATCAGCAAATCCCTGGACTTTTACACCCGCGTGCTGGGTTTCTCGCTGGTTGAAAAGCGTGATTTCCCGGAAGCGGAATTCAGCCTGTATTTCCTCGC GCTGGTCGACAAGGCACAGATCCCGGCCGACGCCGCTGCTCGCACGGAGTGGATGAAGTCGATTCCAGGCATTCTCGAACTGACCCATAACCATGGCACC GAGAATGACGCGGATTTCGCTTATCACAACGGCAATACCGATCCGCGCGGTTTTGGCCATATCTGCATTTCGGTGCCGGATATCGTCGCGGCCTGTGCGC GTTTCGAAGAACTGGGCTGCGACTTCCAGAAGCGTCTGACCGATGGCCGCATGAAAAGCCTGGCGTTCATCAAGGATCCGGATGGTTACTGGGTCGAGAT CATTCAGCCTGCGCCGCTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAGCAAAAGCCCCTCACCCTAGCCCTCTCCCAGAGGGAGAGGGGACTGATTGGGGGATATTCAAGAATTCCGCCGACGTGAAAGATCTTTACCGAATCCA TAATCGACTCGGTCATTCAGGTCGATGGACAGCGCCAGACACCTCGGTCGGCTCCCTCTCCCTCGGGAGAGGGCTGGGGTGAGGGGCAGCGTTTTACACG CAATAAAAAACCCGTGATCGCTCACGGGTTTTTCATTTCAGGCTGGACGCTTACGCCGGAGCGGAGGTGCGGATCAAGTGATCAAATGCACTCAGCGAAG CCTTGGCGCCCTCGCCCACCGCAATCACGATCTGCTTGTACGGCACAGTCGTCACATCACCAGCAGCGAAGATCCCCGGGATCGAAGTCTCACCACGGTT ATCGACAATGATCTCGCCACGCGGCGACAGCTCGATGGTGCCCTTCAGCCAGTCGGTGTTCGGCAGCAAACCGATCTGCACGAAGATCCCTTCCAGCTCG
|
|
Amino Acid Sequence |
>lactoylglutathione lyase
MSLHELNTFPGVTATPDSATRNFVFNHTMLRVKDISKSLDFYTRVLGFSLVEKRDFPEAEFSLYFLALVDKAQIPADAAARTEWMKSIPGILELTHNHGT ENDADFAYHNGNTDPRGFGHICISVPDIVAACARFEELGCDFQKRLTDGRMKSLAFIKDPDGYWVEIIQPAPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|