Pseudomonas chlororaphis EA105, NZ35_RS07750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCTTTCTCGTGCAATTGAGCGAAATACGCGCCCAGTTGAAATCTCAGTGAGTCAGTCCCTTCGCTGGTGCCCTGCAACTGGCGCACGGTGTTGCCTGCC AGTGGGCTGTAATAAACGCAGTCACGCTCGATGCTCGGGATGCGATAGACCGCGATGACTTTCGGGCAGAGGATGCCGCGCTGTTCGAGTGCGCGTGTAT TGTCGGCAAAGCGTTGGGCATAGGGGTAGAACAGTGCCGAACTGAGCAGCCGCTTGCGGCGGAACAGCTTGAGCATGCGTCCATCGGCCAATCTGAGCAC TTTGTCGCCGGAGCCGTCGGCCTCCAGTACGTGTGCACCCTTGCGCAGTGCCTCGTAAGTGCTTTGATCAATCGATTGCATATCGGGCTCCCCATCATTA GCGGGGTATCTTAACCGACTTGGTCGAAGGCTGGCTTGAAGTCATGTTTATCGGGGCAAAAACGCGTGTGATATCATCGGCGCCTCACTGAATTGCGCGG
DNA Sequence for Gene
>NZ35_RS07750
ATCACCATGAGCAGTCCTGAACCGAAAGCCCAGTCAACGCTGGCGATCTATTTCCGCCTTTTGGCTTACGTGCGGCCTTATGCCGGTCTCTTCCTTCTCA GTATCGTCGGGTTTCTGATCTTCGCATCGACTCAACCGATGCTCGCTTACATCCTCAAGTATTTCGTCGATGGCCTGGCCAATCCTGAAGCCAGCCTGTT CCCGGGTAACCCTTATCTGGGCAAATTGCAGTTGCTCGAAACCGTGCCGCTGATGATCGTGCTCATCGCGCTGTTGCAGGGCGTGGGTTCGTACCTTGGC AACTTCTTCCTGGCCCGGGTCTCCCTGGGGTTGGTGCATGACCTGCGGGTGGTGCTGTTCAACAAATTGCTGGAGTTGCCCAATCGCTTCTTCGACAAGA ACAATTCCGGCCACCTGATTTCCCGCATCACCTTCAACGTGACGATGGTCACCGGGGCGGCAACAGACGCGATCAAAGTCGTCATCCGTGAAGGCATGAC CGTGATTTTCCTGTTCTGCACGCTGTTGTGGATGAACTGGAAGCTCACTCTGGTAATGGTCGCTATCCTGCCGTTGATCGGTTTGATGGTGAACAGCACC AGCAAAAAATTCCGCAAGCAGAGCAAGAAGATCCAGGTCTCGATGGGTAACGTCACGCACGTCGCGTCCGAGACCATTCATGGCTACCGCGTTGTGCGCA GTTTCGGCGGCGAGCAGTACGAAAAGGATCGCTTTCGCGATGCCAGCCAGAGCAACACCGACAAGCAGTTGACGATGACCAAGACCGGCGCCGTTTACAC GCCGATGTTGCAACTGGTGACTTACAGCGCCATGGCGGTGGTCATGTTCCTCGTGCTGTACCTTCGTGGCGACGCATCGCCGGGCGATCTGGTGGCTTAC ATCACCATGGCCGGTTTGTTGCCAAAACCGATTCGCCAGCTCTCGGAAGTCAGCTCGACCATTCAGAAAGGCGTGGCCGGTGCCGAAAGTATTTTCGAGC AACTGGATGAGCCGGCTGAAGTGGATCAGGGCGCGGTCGAACGCGATCGCCTTGAGGGCCGTCTGGAAGTGCGCAACCTCAGTTTCCAGTACCCGGACAC TGACAAGCAGGTGCTCAATGACATCAGTTTTGTCGTTGAACCGGGGCAAATGGTCGCGCTGGTGGGGCGTTCGGGCAGCGGCAAGTCGACCCTTGCCGGG CTTATTCCGCGTTTCTATCAGCATGAACAGGGCGAGATTCTGCTCGACGGCGTTCGCGTGCAGGACTTCACCTTGCACAGTCTGCGACGCCAGATTGCGC TGGTGACCCAGCAGGTCACGCTGTTCAACGATACGGTGACCAACAACATCGCTTATGGCGATCTGGCGGGTGCGCCGTTCGAGGAGGTCAAGCGGGCCGC TTCCGAGGCCTATGCCGATGAGTTCATCGTCAAGATGCCGGAAGGTTACGAAACCCTGGTCGGTGAAAACGGCGTGTTGCTGTCTGGCGGCCAACGCCAG CGAATCGCCATCGCTCGGGCGCTGCTCAAGGATGCGCCGCTGCTGATTCTCGACGAGGCTACTTCCGCCCTCGATACCGAGTCGGAGCGACATATCCAGG CGGCGCTGGATCATGTGGTGCAAAACCGCACGACCCTGGTGATCGCTCACCGCTTGAGCACCATTGAGAAGGCTGACCTGATTCTGGTCATGGACGAAGG CCGGATCGTCGAGCGCGGTACCCACGCGCAATTGCTGCAGCAGAACGGCTACTACTCCCGCCTGCACGCCAAAGAGTTTGAAGAGGGCGATGAACCTCTG CCGGCCCACGCGACCAACGTATGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGATGTTTCGCAGCTTTCGTGAGCGTGGCTGGACTGAAATCGACCGCGATGCCTACGCCCGGGCCTGGCAGTGTTTCGGCGGCAGCTTCGCTACGCATCC CGAGGTGGTTGAGCGACTGTCGGCGTTCGTGGGTATCGAACTGCGTTATCTGGGCTGGGTCGTTGGCGGTGAAGTAGTGGCCGCCATTCCTTGCTGGGGC CGTCATGTTGCCTTGTCCAAGGAAGTGCTCAAGCGTGAGGGCAAGCGCGGCTTGCTGGACATGGGCAACGCGGAGATCATCCTGCCGATTGCCCCCGATG TCGTCGTACCGGTGCGCCAGCGTATGGCTTATGTCTCCCAGCTCAATGCCGAGCAGATCAGCACCTTGAAAGTGCAGCCCGAGGGCTTGGCTCTGGCGCG GTTGCCGGAAGAGTATTCGAAGAAGTTTCGCTACAACCAGCGCCGCGAACAGCGCCTGCTCGAAGAGGCGGGTGGTTCGCTGGTGCCCATGTCCGAGTTT
Amino Acid Sequence
>lipid transporter ATP-binding/permease
MTMSSPEPKAQSTLAIYFRLLAYVRPYAGLFLLSIVGFLIFASTQPMLAYILKYFVDGLANPEASLFPGNPYLGKLQLLETVPLMIVLIALLQGVGSYLG NFFLARVSLGLVHDLRVVLFNKLLELPNRFFDKNNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFCTLLWMNWKLTLVMVAILPLIGLMVNST SKKFRKQSKKIQVSMGNVTHVASETIHGYRVVRSFGGEQYEKDRFRDASQSNTDKQLTMTKTGAVYTPMLQLVTYSAMAVVMFLVLYLRGDASPGDLVAY ITMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEPAEVDQGAVERDRLEGRLEVRNLSFQYPDTDKQVLNDISFVVEPGQMVALVGRSGSGKSTLAG LIPRFYQHEQGEILLDGVRVQDFTLHSLRRQIALVTQQVTLFNDTVTNNIAYGDLAGAPFEEVKRAASEAYADEFIVKMPEGYETLVGENGVLLSGGQRQ RIAIARALLKDAPLLILDEATSALDTESERHIQAALDHVVQNRTTLVIAHRLSTIEKADLILVMDEGRIVERGTHAQLLQQNGYYSRLHAKEFEEGDEPL PAHATNVC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site