Pseudomonas chlororaphis EA105, NZ35_RS21950
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCCGAGCGTCTGTGCGGGCTGAAAAGCCGTACATTCCTTGCCGAGCTGATGCCGCATTATCCGATCTACGTGCCGCTGCTGCCGGATTCCGCCCAAGA GGCGATGGGCCAAGTGCATCCGCGTGCTCAGATCACCTTCGACATCCTGATGCGCGAAGGCTTCGAGACTGATCACTACATCGACATTTTCGACGGTGGC CCGACCCTGCATGCGCGTGTTTCGGGGATCCGTTCGATCGCCCAGAGCCGCGTGGTGCCGGTGAAGATCGGCGAGCCGGTGAAAGGTGCCGGGCGCCAGT ATCTGGTGGCCAACGCGCAGTTGCAGGATTACCGCGCGGTGCTGCTGGAGCTGGATTACGCGCCGGGCAAACCGGTGACTCTGGATCTGGAAGCGGCCGA AGCCTTGGGCGTCGGTGAAGGTGCCAGCGTGCGCCTGGTGGCGGTTTAACGCCTTAGCGAGTTTCACGGGTGGCGAAGGCGGCCCGTTTGAGGAGATAGC
|
|
| DNA Sequence for Gene |
>NZ35_RS21950
ATGATTGTTCGTCCCGTACGCAGCAGCGATTTATCCGCGCTGATCGACCTGGCCCGCAGCACCGGCACCGGCCTGACCACATTGCCGGCCAACGAAGAAC GTCTGGCCCATCGGGTTGGCTGGGCCGAGAAGACCTTTCGCGGCGAAGCCGGCCGTGGCGATGCGGACTACCTGTTCGTGCTCGAAGACGATGACGGACG TGTGGTGGGGATTTCCGCCATCGCTGGCGCCGTCGGCATGCGTGAGCCTTGGTACAACTTCCGTGTCGGTCTGACGGTCAGCGCTTCGCAAGAGCTGAAC ATCTATCGCGAGATTCCGACGCTGTTTCTGGCCAACGACCTGACCGGTAATTCCGAGCTGTGCTCGCTGTTCCTGCACGCCGATTACCGCAGCGGTCTGA ATGGCCGCATGTTGTCGAAGGCGCGGATGCTGTTCATCGCCGAATTCCCTGAACTGTTTGGCAACAAGATCATTGCCGAAATGCGTGGTGTGTCGGATGA CGCCGGCCGTTCGCCGTTCTGGGAAAGCCTCGGTCGGCACTTCTTCAAGATGGAATTCAGTCAGGCCGATTACCTCACCGGCGTAGGCAACAAGGCTTTC ATCGCTGAGCTGATGCCGAAGTTTCCGCTGTACACCTGCTTCCTTTCGCCCGATGCACGCAGTGTGATCGGTCAGGTTCACCCGGATACCGAGCCAGCGC TGTCGATGCTCAAGGGTGAAGGTTTCAGCTATCAGGGTTATGTCGACATCTTCGATGCAGGCCCGGCCATCGAGTGCGAAACCGGCAAGATCCGCGCAGT GCGTGACAGCGAAGCGCTGGTGCTGGCCGTTGGCACGCCGGGCGACGACGCTACGCCGTTCATCATCCATAACCGCAAACGCGAAGACTGCCGCATCACC GCTGCACCGGCGCGTCTCGCTGCCGGCACGCTGGTGGTTGATCCGCAAACCGCCAAACGTCTTCAACTCAACGCTGGCGACCAAGTGCGCGCCGTGGCGT TGTCCGCTGCACGGGAGTCGAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGAATTCGCTATACATCGCAGGTGAGTGGCTGGCCGGTCAGGGCGAAGCGTTTCAATCGCTGAACCCGGTGACCCAGCAAGTGCTGTGGTCGGGGGAGGG CGCGACCGTTGCTCAGGTTGAATCGGCGGTGCAGGCGGCGCGTCAGGCATTTCCGCAGTGGGCACGTCGCACGCTGGATGAGCGCATCAGCGTGCTTGAG GCTTTCGCCGCGTCGCTGAAAAACCACGCTGACGAACTGGCTCGCACCATTGGTGAAGAGACCGGCAAGCCGCTGTGGGAATCCGCGACTGAAGTCACCA GCATGGTCAACAAGATTGCCATCTCGGTGCAGAGCTACCGCGAGCGTACCGGCGAGAAGAGCGGCCCGTTGGGCGACGCCACTGCCGTACTGCGTCACAA GCCACATGGCGTGGTCGCGGTGTTCGGCCCTTACAACTTCCCCGGCCACTTGCCGAACGGTCACATCGTTCCGGCGCTGCTGGCGGGTAACAGCGTGCTG
|
|
| Amino Acid Sequence |
>arginine N-succinyltransferase
MIVRPVRSSDLSALIDLARSTGTGLTTLPANEERLAHRVGWAEKTFRGEAGRGDADYLFVLEDDDGRVVGISAIAGAVGMREPWYNFRVGLTVSASQELN IYREIPTLFLANDLTGNSELCSLFLHADYRSGLNGRMLSKARMLFIAEFPELFGNKIIAEMRGVSDDAGRSPFWESLGRHFFKMEFSQADYLTGVGNKAF IAELMPKFPLYTCFLSPDARSVIGQVHPDTEPALSMLKGEGFSYQGYVDIFDAGPAIECETGKIRAVRDSEALVLAVGTPGDDATPFIIHNRKREDCRIT AAPARLAAGTLVVDPQTAKRLQLNAGDQVRAVALSAARESK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|