Strain | Pseudomonas chlororaphis strain EA105 contig_22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCAATAAACGTGCCGGGTGCCCCGCTTGCGCATCGGGCCGAGCGTTAAACGCTTTGCAACTTTCTGATATTCATCAGTTTTAATTATTCACCGGGTGAGT TCGCGGAAACTTGTCTGGGTGCTCAGGCTAAACACCTGGCAAGTTGTCCGAACAGACAGGACTCAAACTGGTGCACTGCATTTATTTTCATCGTGAGCGA GCAACCGCAGCTCAACTTCAAGCGGCTGATTTCACATAGGAAATCTTGCTCATATTTCCATCCTGTCAAGTGCGTCAAAATGGTGAACGGCCTCACCATT TTGGTGATTTACATTTTTTATCGTTATTTTTCATACACTTAAAGTAGTCATAAGCTTATAAAAAATAATCTTGATCTATTGCAAATCTGCGACTAGTTTC TATTCCTGACAGCGCTGACAGGAATACACCCTGCAACGCCGTACATCAATAAAACATCTAGAACCGACACAAGTCGGTCAATGCCTGCGAGGAACTCGGA
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DNA Sequence for Gene |
>NZ35_RS20115
ATGTCTCTGTTGATCCGTGGCGCCACCGTTGTTACCCATGATGAAAGTTATCGCGCCGACGTCTATTGCGCCGACGGCGTGATCAAAGCCATCGGTGAAA ACCTTGATATTCCCGCCGGCGCCGAAGTACTCGACGGCAGCGGCCAATACCTGATGCCCGGCGGCATCGATCCGCACACCCACATGCAACTCCCCTTCAT GGGCACTGTGGCCAGTGAGGATTTCTACAGTGGCACGGCGGCCGGTCTGGCCGGCGGCACCACATCGATCATCGACTTTGTAATTCCCAATCCGCAGCAG TCGCTGATGGAGGCGTTTCATCAGTGGCGCGGCTGGGCGGAAAAGTCTGCCTCCGACTATGGCTTCCACGTTGCAATCACCTGGTGGAGCGAACAGGTGC GCGAGGAAATGGCCGAGCTGGTCAGCCATCACGGCATCAACAGCTTCAAGCATTTCATGGCCTACAAGAACGCGATCATGGCTGCCGATGACACGCTGGT GGCGAGTTTTGAACGCTGCCTGGAACTCGGCGCGGTACCGACCGTACACGCGGAAAATGGCGAGTTGGTTTATCACCTGCAACGCAAGTTGATGGCCCAG GGCATCACCGGCCCTGAGGCGCATCCGCTGTCGCGGCCATCGCAGGTTGAAGGTGAAGCGGCGAGTCGAGCGATTCGTATCGCTGAAACCATCGGCACGC CGTTGTATCTGGTGCACGTTTCGACCAAAGAGGCCCTCGACGAAATCACCTATGCACGCAGCAAGGGTCAGCCGGTGTACGGCGAAGTCCTCGCCGGGCA TTTGCTGCTCGACGACAGCGTGTATCAGCACCCGGACTGGCAGACCGCTGCCGGTTACGTGATGAGCCCGCCGTTCCGCCCGCGCGGCCATCAGGAGGCG CTGTGGCACGGACTGCAAAACGGCAATCTGCACACCACCGCCACCGACCACTGCTGCTTCTGCGCCGAGCAGAAAGCCGCCGGGCGCGATGACTTCAGCA AGATTCCCAACGGCACGGCCGGTATCGAAGATCGCATGGCGGTGTTGTGGGATGAAGGCGTCAACAGCGGGCGTTTATCGATGCAGGATTTCGTCGCCCT CACCTCCACCAACACCGCGAAGATCTTCAATCTCTACCCGCGCAAAGGTGCGATTCGCGTCGGCGCCGATGCCGATCTGGTGCTGTGGGACCCGCAAGGC ACCCGCACTATTTCCGCCAAGACCCACCATCAGCAGGTGGACTTCAACATCTTCGAAGGCAAGACCGTGCGCGGCGTGCCGAGCCATACCGTCAGCCAGG GCCGGCTGGTCTGGGCCGATGGCGACCTGCGCGCCGAGCGTGGTGCCGGGCGGTACATCGAACGGCCGGCGTATCCGGCGGTGTTTGATTTGCTGAGCAA GCGGGCTGAGTTGCATAAGCCGACTGCTGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGCGGCCTTCGGCCTATCGCTGGCAAGCCAGCTCCCACAGGGATCTGTGGTGCTCACAAAACCTTGTGGGAGCTGGCTTGCCAGCGATGAGGCCATCCC GAACGCCACAAAAACCACTGCCCATCAGAGGCAGAGAACCTCAATAACCGTGAGGCAAAAAAACGTGATCGAGACCCTGAACCATCTCCCCCACCCGCAC GAAAGCGCGGCCGCCCTCGCCGGGCATTTCACCGATCTGGCGCCGCCGCTCAACGACCGGCAGGCGCATCTGGAAGCCTCGCGCTGCCTGTATTGCTACG ACGCACCGTGCGTGAATGCGTGCCCGAGCGAGATCGACATCCCCTCGTTCATCCGCAACATCCATCAAGACAACGTGCCCGGCGCTGCGCAGAAAATCCT TTCGGCGAATATCCTCGGTGGCAGTTGCGCCCGAGTCTGTCCGACAGAAATCCTCTGCCAACAAGCCTGCGTGCGCAACAACGCCCACGAATGCGCACCG
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Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFYSGTAAGLAGGTTSIIDFVIPNPQQ SLMEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQ GITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHVSTKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQEA LWHGLQNGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLSMQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQG TRTISAKTHHQQVDFNIFEGKTVRGVPSHTVSQGRLVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAELHKPTAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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