Pseudomonas chlororaphis EA105, NZ35_RS19735 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis strain EA105 contig_21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACCCGGCGCCGTTCTGCATGCTCGATGAAGTTGACGCACCGCTGGATGACGCTAACGTTGGACGCTACGCACGCTTGGTCAAAGAGATGTCGCAGACC GTGCAGTTCATCTATATCACCCACAACAAGATCGCCATGGAAATGGCCGAGCAGTTGATGGGCGTAACGATGCATGAACCGGGTTGTTCGCGACTGGTAG CCGTGGATGTCGAGGAGGCGATGGCGATGGTGGACGCCTGAGCCAGCGTGGTGTCGGAAAGGTAATTGAGGGTTGTAGGACTTTTTTACCGGCTTCGACT TGCTGGCCAATCGACATATTCGCGCAAGCCAATGAGACAGACGGTGTAAAGTTGTCTTTGGTCGTGCTAGTTTAATGTCAATTTTTCGTATACGTGGGCA AAACGCCTGTCAGAACATAGAGTTGGCGCCACGTTTTAAAGCGGTTTGCACAATGTAAACCCCTTATTTTTCAGCATTTTTTATAGAGGCACGGGATTAC
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| DNA Sequence for Gene |
>NZ35_RS19735
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATCATTGTGATAGCCGGTATTCTTTTCGATGGCTGGCGCCGTATGCGCGGCGGCAAGGGAA AACTGAAATTCCGTCTTGACCGAAGTCTGTCCAACCTGCCGGACGAGGACACCAGCGCTGAGCTGTTGGGCCCGGCCCGCGTACTGGACACGCATAAAGA GCCGCAACTGGACGAACACGATCTGCCGTCGGTGAGCATGCCGGCCCGCGAAGCACGCGAGCCTCGCGAATCCGGCTCGAAACGTGGCAAACGTGGCAGC AATGGCCCGGCTCAGGGCGACCTGAACCTCGACCTGGATCTGGACGGCGGCCCGAGCTTCAGCAGCCGCGACGACGATTTCGCCGAAGACAGCAAGCCTT CGCCTGCCGTGGTCGACAAAGACCAGCCGCAAGCTGAAGAAGTGCTGGTGATCAGCGTGATCTGCCGCGACGCTGCCGGCTTCAAAGGCCCGGCGCTGTT GCAGAACATTCTCGAAAGCGGTCTGCGTTTCGGCGAGATGGATATTTTCCATCGTCACGAAAGCATGGCCGGCAACGGTGAAGTGCTGTTCTCCATGGCC AATGCGGTCAAGCCGGGCATCTTTGATCTGGACGACATCGACCATTTCAGCACCCCGGCGGTGAGCTTCTTCCTCGGCCTGCCAGGCCCGCGTCATCCGA AGCAAGCCTTCGACGTGATGGTGGCGGCAGCCCGCAAGCTCTCGCAGGAACTGAACGGCGAACTGAAAGATGACCAGCGCAGTGTTCTGACCGCGCAGAC CATCGAACACTACCGTCAGCGCATCGTTGAATTCGAACGTCGCGCCCTGACCCAGAAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCAAGATCAAAAGATCGCAGCCTCGTTTCACTCGACAGCTCCTACAGGAATGCGATTTCTGTAGGAGCTGTCGAAGGCTGCGATCTTTTGCTTCTGCT GCCACAGATAGATGAATTAGAGCAGCCTCGGCTGCTCTTTTGCTTTATGAGAGAACACCCCATGACCGCCGCCAAAAACCGCATTATCGAGCTACGTGCT GAACTCGATCAACACAACTACCGTTATCACGTCCTCGACGAGCCGAGCATTCCGGACGCCGAGTACGACCGGTTGTTCCACGAGCTCAAGGCGCTGGAAG CGGCCAATCCGGAACTGATCACCAGCGACTCGCCGACCCAGCGTGTCGGCAGCGTGGCGCTGACCGCGTTCACCCAGGTGCGTCACGAAGTGCCGATGCT CAGCCTCGGCAACGCCTTCGAAGAAAGCGACATGCGCGAGTTCGATCGCCGGGTGACCGAAGGTCTGGACCTGCCGGCCGGCGATTTGTTCGGTGGCAGT
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSLSNLPDEDTSAELLGPARVLDTHKEPQLDEHDLPSVSMPAREAREPRESGSKRGKRGS NGPAQGDLNLDLDLDGGPSFSSRDDDFAEDSKPSPAVVDKDQPQAEEVLVISVICRDAAGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMA NAVKPGIFDLDDIDHFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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